Factsheet for TraesCS2D01G172100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G191200.1	Wheat	golgi	96.45	96.45
EER97557	Sorghum	cytosol, peroxisome, plastid	90.91	91.11
Os07t0620300-01	Rice	plasma membrane	89.36	89.36
HORVU2Hr1G030220.1	Barley	cytosol, mitochondrion, peroxisome, plastid	96.67	85.83
Solyc04g076230.2.1	Tomato	cytosol	79.6	79.42
AT4G24550.2	Thale cress	cytosol	77.38	77.38
PGSC0003DMT400024188	Potato	cytosol	77.38	77.21
KRH72454	Soybean	cytosol	68.74	76.92
GSMUA_Achr10P...	Banana	cytosol	67.63	76.25
Bra010489.1-P	Field mustard	cytosol	76.27	75.94
KRH16840	Soybean	cytosol	75.83	75.66
Bra013813.1-P	Field mustard	cytosol	74.72	75.56
KRH61131	Soybean	cytosol, nucleus	73.61	74.94
CDY34290	Canola	cytosol	74.94	74.61
GSMUA_Achr6P10200_001	Banana	cytosol	69.18	74.46
CDY03442	Canola	cytosol	74.5	74.17
CDX92642	Canola	cytosol	75.61	73.49
CDY24840	Canola	cytosol	74.94	73.0
KRH51806	Soybean	cytosol	62.31	72.99
CDY08937	Canola	cytosol	73.39	72.59
CDY11020	Canola	cytosol	33.92	70.51
Bra019220.1-P	Field mustard	cytosol	70.51	68.83
VIT_18s0001g13000.t01	Wine grape	cytosol	74.28	67.4
TraesCS3D01G255100.2	Wheat	cytosol	30.82	32.4
TraesCS1D01G371000.1	Wheat	cytosol	29.49	29.17
TraesCS6D01G251100.1	Wheat	extracellular	28.16	29.0
TraesCS2D01G171900.1	Wheat	endoplasmic reticulum, plasma membrane	2.0	25.0
TraesCS1D01G240100.2	Wheat	cytosol	22.62	24.46
Zm00001d002925_P002	Maize	plastid	74.72	24.0

Protein Annotations

Gene3D:2.60.40.1170	MapMan:22.5.2.2.3	Gene3D:3.30.450.60	InterPro:AP2_Mu_C_sf	InterPro:Clathrin_mu	InterPro:Clathrin_mu_CS
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005802
GO:GO:0005829	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0016020	GO:GO:0016192
GO:GO:0030124	GO:GO:0030131	InterPro:IPR028565	InterPro:Longin-like_dom_sf	InterPro:MHD	PFAM:PF00928
PIRSF:PIRSF005992	PRINTS:PR00314	ScanProsite:PS00991	PFscan:PS51072	PANTHER:PTHR10529	PANTHER:PTHR10529:SF270
SUPFAM:SSF49447	SUPFAM:SSF64356	EnsemblPlantsGene:TraesCS2D01G172100	EnsemblPlants:TraesCS2D01G172100.1	TIGR:cd09253	SEG:seg

Description

No Description!

Coordinates

chr2D:-:115951774..115956191

Molecular Weight (calculated)

48806.5 Da

IEP (calculated)

6.539

GRAVY (calculated)

-0.213

Length

451 amino acids

Sequence
(BLAST)

001: MISQFXXXXX XXXXXXXXXX RGEVPKGSAE IFFRKVKFWN EDEAEEAPPV FNIDGVNYVH VKVAGLFFVV TTMVNISPSL LLELLQRIAR VTKDYLGVLN
101: EDSLRKNFIL VYELLDEVID FGYPQTTSTE ALKSYIFNEP IMVDAGRLPP LGPAAMFMQG TKRMPGTAVT KSVVANEPGG KKREEIFVDI IEKISVTFSS
201: SGYILTSEID GTIQMKSYLS GNPEIRLALN EDLGIGKNSS STHDYRSSSG GGSVVLDDCN FHESVQLDSF DIDRTLHLIP PDGEFPVMNY RMTQEFKPPF
301: RVTALIEEAG PSRAEVLLKI RADFPANVTA NTITVQMPVP SYTMRASFEL EAGAVGQTTD FKEGTRRLEW NLKKIVGGSE HTLRAKLTFS QETHGNLTKE
401: AGPVNMNFTI PMYNASKLQV RYLQIAKKSK TYNPYRWVRY VTQANSYVAR L

Best Arabidopsis Sequence Match ( AT4G24550.2 )
(BLAST)

001: MMISQFFVLS QRGDNIVFRD YRAEVPKGST ETFFRKVKFW KEDGNAEAPP IFNVDGVNYF HVKVVGLYFV ATTRVNVSPS LVLELLQRIA RVIKDYLGVL
101: NEDSFRKNFV LVYELLDEVI DFGYVQTTST EVLKSYIFNE PIVVSPARLQ PIDPAAIFTQ GAKRMPGTAV TKSVVANDPG GRRREEIFVD IIEKISVTFS
201: SSGYILTSEI DGTIQMKSYL SGNPEIRLAL NEDLNIGRGG RSVYDYRSSS GSGVILDDCN FHESVRLDSF DSDRTLSLVP PDGEFPVMNY RMTQEFKPPF
301: HVNTLIEEAG RLKAEVIIKI RAEFPSDIIA NTITVQMPLP NYTSRASFEL EPGAAGQRTD FKESNKMLEW NLKKIVGGGE HTLRAKLTFS QEFHGNITKE
401: AGPVSMTFTI PMYNVSKLQV KYLQIAKKSS SYNPYRWVRY VTQANSYVAR I

Arabidopsis Description

AP4MAP4M [Source:UniProtKB/TrEMBL;Acc:A0A178UX13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.