Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90327 | Sorghum | mitochondrion | 70.81 | 72.11 |
| TraesCS7B01G318800.1 | Wheat | plasma membrane | 54.23 | 59.25 |
| TraesCS7A01G418600.1 | Wheat | plasma membrane | 53.87 | 58.86 |
| TraesCS7D01G411300.1 | Wheat | plasma membrane | 53.69 | 58.66 |
| Os06t0701600-01 | Rice | plasma membrane | 51.53 | 56.19 |
| HORVU7Hr1G096920.11 | Barley | mitochondrion, plasma membrane | 51.35 | 56.1 |
| Os01t0532600-00 | Rice | plastid | 49.01 | 53.44 |
| GSMUA_Achr6P30960_001 | Banana | plasma membrane | 38.74 | 43.17 |
| GSMUA_Achr7P16030_001 | Banana | extracellular, plasma membrane, vacuole | 19.64 | 41.6 |
| Zm00001d002378_P001 | Maize | plastid | 36.04 | 37.81 |
| Zm00001d040627_P001 | Maize | plasma membrane | 35.14 | 36.45 |
Protein Annotations
| EntrezGene:103626405 | MapMan:24.2.20 | UniProt:A0A1D6GV20 | ProteinID:AQK66791.1 | InterPro:Cat_transpt | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | GO:GO:0098655 | PFAM:PF02386 | PANTHER:PTHR31064 |
| PANTHER:PTHR31064:SF11 | TMHMM:TMhelix | UniParc:UPI00022124B8 | EnsemblPlantsGene:Zm00001d014680 | EnsemblPlants:Zm00001d014680_P001 | EnsemblPlants:Zm00001d014680_T001 |
| SEG:seg | : | : | : | : | : |
Description
Sodium transporter HKT1
Coordinates
chr5:-:58716795..58719001
Molecular Weight (calculated)
58555.2 Da
IEP (calculated)
9.319
GRAVY (calculated)
0.370
Length
555 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVRLHVLAS TARHAASSSA LVFRLVAFRL TPLLLHLSYF LAIDLLGFLA LVLLRRSSPA AGAYRPRYVD VLFMSTSAVT VTGLATVEME DLSASQLVVL
101: TLLMLLGSEV FVSVLGLVLE SSRQQRQQRG QSRRQDHAGR VIRPSSVTAA VRDEPDLEEA GNNINSQAPP SSSEDSSGDG DNHKERCRAV RSLALVLSAY
201: MAAVLVAGSV LVFAYVATVP AARDVLARKR LGAALFSVSA TVSSFTNGGL LPTNESMAVF AANRGLLLLL AGQILAGCTL LPVFLRLAVG ATRWVARAVS
301: AGRGGHDEEL EPVSVDRSAA AAGFGHLLPS VPRAASLAAT VVAVAAAAAA LLCCMNWNSA VFAGLTPGEK VTNAVFMAVN VRQAGENSVD CSLVAPAVLV
401: LFLAMMCIPA SATLLSVHDS GSDRKRSGAG EAERKDGTEK KRRLSLNSML LSPLACNAAA VMLACVTERR SIAGDPLNFS TFNVIFEVVS AYGNVGLSTG
501: YACSRLLPAA AEATTACHDK PYSFSGWWSD QGKLLLVLLM LYGRLKCFHG QRRRG
101: TLLMLLGSEV FVSVLGLVLE SSRQQRQQRG QSRRQDHAGR VIRPSSVTAA VRDEPDLEEA GNNINSQAPP SSSEDSSGDG DNHKERCRAV RSLALVLSAY
201: MAAVLVAGSV LVFAYVATVP AARDVLARKR LGAALFSVSA TVSSFTNGGL LPTNESMAVF AANRGLLLLL AGQILAGCTL LPVFLRLAVG ATRWVARAVS
301: AGRGGHDEEL EPVSVDRSAA AAGFGHLLPS VPRAASLAAT VVAVAAAAAA LLCCMNWNSA VFAGLTPGEK VTNAVFMAVN VRQAGENSVD CSLVAPAVLV
401: LFLAMMCIPA SATLLSVHDS GSDRKRSGAG EAERKDGTEK KRRLSLNSML LSPLACNAAA VMLACVTERR SIAGDPLNFS TFNVIFEVVS AYGNVGLSTG
501: YACSRLLPAA AEATTACHDK PYSFSGWWSD QGKLLLVLLM LYGRLKCFHG QRRRG
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.