Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr7P16030_001 | Banana | extracellular, plasma membrane, vacuole | 29.72 | 56.49 |
TraesCS7D01G411200.1 | Wheat | mitochondrion, plasma membrane | 54.02 | 50.66 |
TraesCS7B01G318700.1 | Wheat | plasma membrane | 53.82 | 49.26 |
TraesCS7A01G418500.1 | Wheat | plasma membrane | 53.61 | 49.08 |
HORVU0Hr1G022090.3 | Barley | plasma membrane | 53.41 | 49.08 |
TraesCS7B01G318400.1 | Wheat | plasma membrane | 53.41 | 48.9 |
Os06t0701700-01 | Rice | plasma membrane | 51.81 | 48.68 |
TraesCS7A01G418200.1 | Wheat | plasma membrane | 44.58 | 48.58 |
TraesCS7B01G318800.1 | Wheat | plasma membrane | 45.18 | 44.29 |
TraesCS7A01G418600.1 | Wheat | plasma membrane | 44.18 | 43.31 |
Os06t0701600-01 | Rice | plasma membrane | 44.18 | 43.22 |
TraesCS7D01G411300.1 | Wheat | plasma membrane | 43.98 | 43.11 |
Os01t0532600-00 | Rice | plastid | 42.57 | 41.65 |
HORVU7Hr1G096920.11 | Barley | mitochondrion, plasma membrane | 42.17 | 41.34 |
EER90327 | Sorghum | mitochondrion | 43.98 | 40.18 |
Zm00001d014680_P001 | Maize | plasma membrane, plastid | 43.17 | 38.74 |
GSMUA_Achr1P23660_001 | Banana | plasma membrane | 34.34 | 37.75 |
GSMUA_Achr1P23670_001 | Banana | plasma membrane, plastid, vacuole | 34.14 | 36.88 |
Protein Annotations
EnsemblPlants:GSMUA_Achr6P30960_001 | EnsemblPlants:GSMUA_Achr6T30960_001 | EnsemblPlantsGene:GSMUA_Achr6G30960_001 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 | GO:GO:0016020 | GO:GO:0016021 |
GO:GO:0055085 | GO:GO:0098655 | InterPro:Cat_transpt | PANTHER:PTHR31064 | PANTHER:PTHR31064:SF9 | PFAM:PF02386 |
SEG:seg | TMHMM:TMhelix | UniParc:UPI0002960DC5 | UniProt:M0TBP1 | MapMan:24.2.20 | : |
Description
Cation transporter HKT2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G30960_001]
Coordinates
chr6:-:30903527..30905408
Molecular Weight (calculated)
56555.9 Da
IEP (calculated)
10.057
GRAVY (calculated)
0.331
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSFRRTTN RAREFILTRT YSFDRLNRYL RQLVLFVYRF SALRLSSFCI HLIYFVFLAL LGSLIMVLLK PSDPSFSPSY VDMLFMSTSA LTVSGLGTVE
101: TERLSSAQIA VLTLLMFVGG EVFVTLLGLL LRRTSEHDKR EASADLRLSC VRWLRYIVSS YIFTFHLFGT SLLLIYIYRV SNARDILRKK GINVFLFSLS
201: TTVSSFANGG LIATNENMAA FNRNPTMLLL MIAQVLAGNL LFPLFLRLVI WTLKKITKRE EFRHMLKSTS ETRFSPLLPE KQTCFLSLTV VGLMTALLVL
301: FCSMDWDGAV FDGLTSFEKI VSAFFIAANS RHAGENSIDP SLISPAVLVF IIVMMYLPPS ATFWPAEEDD TSSDGIKKQN KKKKSWVQNL LISQLSCIIV
401: YIILICIIER RKMRRDPLNF SSLNMIFEVT SAYGNVGLST GYSCSRLMKL HPEASCQDKP YSLAGWWSDE SKIILSSVML YGRLKKFSAQ DGKAWRLY
101: TERLSSAQIA VLTLLMFVGG EVFVTLLGLL LRRTSEHDKR EASADLRLSC VRWLRYIVSS YIFTFHLFGT SLLLIYIYRV SNARDILRKK GINVFLFSLS
201: TTVSSFANGG LIATNENMAA FNRNPTMLLL MIAQVLAGNL LFPLFLRLVI WTLKKITKRE EFRHMLKSTS ETRFSPLLPE KQTCFLSLTV VGLMTALLVL
301: FCSMDWDGAV FDGLTSFEKI VSAFFIAANS RHAGENSIDP SLISPAVLVF IIVMMYLPPS ATFWPAEEDD TSSDGIKKQN KKKKSWVQNL LISQLSCIIV
401: YIILICIIER RKMRRDPLNF SSLNMIFEVT SAYGNVGLST GYSCSRLMKL HPEASCQDKP YSLAGWWSDE SKIILSSVML YGRLKKFSAQ DGKAWRLY
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.