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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, vacuole

Predictor Summary:
  • plastid 3
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:vacuole
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P23660_001 Banana plasma membrane 63.12 64.24
VIT_11s0103g00010.t01 Wine grape plasma membrane, vacuole 41.65 51.75
VIT_11s0103g00090.t01 Wine grape extracellular, plasma membrane 9.76 48.39
VIT_11s0103g00050.t01 Wine grape plasma membrane 21.04 43.69
VIT_11s0103g00150.t01 Wine grape plasma membrane 51.84 43.38
VIT_11s0103g00140.t01 Wine grape plastid 50.76 43.33
AT4G10310.1 Thale cress plasma membrane 47.07 42.89
TraesCS4B01G376000.1 Wheat plasma membrane 46.85 42.86
TraesCS4D01G361300.1 Wheat plasma membrane 47.72 42.64
TraesCS4B01G370800.1 Wheat plasma membrane 47.72 42.47
VIT_11s0103g00130.t01 Wine grape plasma membrane 50.98 42.27
HORVU4Hr1G087960.1 Barley golgi, plasma membrane, plastid 47.29 42.0
Bra037912.1-P Field mustard plasma membrane 45.12 41.94
CDY25243 Canola mitochondrion, plasma membrane 45.77 41.62
Bra033189.1-P Field mustard mitochondrion, plasma membrane 45.77 41.62
CDX86865 Canola plasma membrane 44.69 41.53
PGSC0003DMT400077052 Potato endoplasmic reticulum, vacuole 45.12 41.52
Zm00001d040627_P001 Maize plasma membrane 47.94 41.31
CDX94264 Canola mitochondrion, plasma membrane 45.12 41.03
Bra037910.1-P Field mustard mitochondrion, plasma membrane 45.55 40.94
EES02854 Sorghum plasma membrane 48.37 40.84
KRH74148 Soybean plasma membrane 46.42 40.84
CDX86866 Canola mitochondrion, plasma membrane 45.34 40.74
Solyc07g014680.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 34.27 40.41
Os01t0307500-01 Rice nucleus, peroxisome, plasma membrane 48.37 40.25
CDY05096 Canola plasma membrane 38.18 39.55
Solyc07g014690.2.1 Tomato plasma membrane 47.29 39.28
CDX99535 Canola mitochondrion, plasma membrane 44.69 39.24
KRH25841 Soybean plasma membrane 47.51 38.97
CDX99538 Canola plasma membrane 44.47 38.46
KRH55676 Soybean mitochondrion, plasma membrane 47.29 37.98
KRH49067 Soybean plasma membrane 32.75 36.83
CDX90754 Canola plastid 43.82 34.53
Bra000707.1-P Field mustard plastid 43.6 34.36
GSMUA_Achr6P30960_001 Banana plasma membrane 36.88 34.14
GSMUA_Achr7P16030_001 Banana extracellular, plasma membrane, vacuole 18.87 33.21
Protein Annotations
EnsemblPlants:GSMUA_Achr1P23670_001EnsemblPlants:GSMUA_Achr1T23670_001EnsemblPlantsGene:GSMUA_Achr1G23670_001GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006812GO:GO:0008150GO:GO:0008324GO:GO:0016020GO:GO:0016021
GO:GO:0055085GO:GO:0098655InterPro:Cat_transptPANTHER:PTHR31064PANTHER:PTHR31064:SF20PFAM:PF02386
SEG:segTMHMM:TMhelixUniParc:UPI0002965D7BUniProt:M0S2H4MapMan:24.2.20:
Description
Putative Sodium transporter HKT1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G23670_001]
Coordinates
chr1:-:18104195..18106474
Molecular Weight (calculated)
51638.9 Da
IEP (calculated)
9.549
GRAVY (calculated)
0.437
Length
461 amino acids
Sequence
(BLAST)
001: MPPPSTVMDI TFHRNSLIHL LSQVNPFWIQ FFYFLSSSIT GFLLLKLLPT RDATSRPTNV DLLFMSVSAN TVSSMDTMEM EVFSNYQLAM RDSALDAAGT
101: ELATLSDQRR SSDLKFSSRK HLFFVVLGYL LVGHVVGFLL ILVYLRLVPE AGAVLERKGI NASLFSIFIT VSTFANCGFV PTNENMVVFR TYSGLLLILT
201: VQVLVGNTLY ASCLWAVIWL LKKLTKRREY DYLLTNYGEM ECNHLLPGSH SLYLALTVAG LVLVQFGLFC CMEWTSEILS GLSTYQKVVG VVFQCVNSRY
301: AGETIVDLAA VAPAILVLFV VMMYIPPYTC FLPRKGDKQL LKGRERSRKK QGLSLIFSPL SYIAIFTIIA CITERRQISE DPINFSVLNI VVEVVSAYGT
401: VGFTTGYSCK RQVKADVHCK DVSAGFSAKW SSKGKLVLIV VMLFGRLKRF SMRGGKHWKF I
Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.