Factsheet for HORVU4Hr1G087960.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

plastid 1
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	golgi, plastid
ChloroP:	plastid
MultiLoc:	golgi
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G361300.1	Wheat	plasma membrane	80.73	81.2
TraesCS4B01G376000.1	Wheat	plasma membrane	78.61	80.95
TraesCS4B01G370800.1	Wheat	plasma membrane	76.11	76.25
Os01t0307500-01	Rice	nucleus, peroxisome, plasma membrane	66.67	62.45
EES02854	Sorghum	plasma membrane	65.51	62.27
Zm00001d040627_P001	Maize	plasma membrane	62.04	60.19
VIT_11s0103g00090.t01	Wine grape	extracellular, plasma membrane	9.25	51.61
VIT_11s0103g00050.t01	Wine grape	plasma membrane	20.42	47.75
GSMUA_Achr1P23660_001	Banana	plasma membrane	41.43	47.46
GSMUA_Achr1P23670_001	Banana	plasma membrane, plastid, vacuole	42.0	47.29
VIT_11s0103g00010.t01	Wine grape	plasma membrane, vacuole	32.95	46.09
VIT_11s0103g00140.t01	Wine grape	plastid	46.82	45.0
KRH74148	Soybean	plasma membrane	44.89	44.47
VIT_11s0103g00130.t01	Wine grape	plasma membrane	47.59	44.42
VIT_11s0103g00150.t01	Wine grape	plasma membrane	47.01	44.28
AT4G10310.1	Thale cress	plasma membrane	42.97	44.07
KRH25841	Soybean	plasma membrane	46.82	43.24
Solyc07g014680.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	32.37	42.97
CDX86865	Canola	plasma membrane	41.04	42.94
Bra037912.1-P	Field mustard	plasma membrane	41.04	42.94
KRH49067	Soybean	plasma membrane	33.72	42.68
CDY25243	Canola	mitochondrion, plasma membrane	41.43	42.41
Bra033189.1-P	Field mustard	mitochondrion, plasma membrane	41.43	42.41
KRH55676	Soybean	mitochondrion, plasma membrane	46.63	42.16
PGSC0003DMT400077052	Potato	endoplasmic reticulum, vacuole	40.27	41.72
CDX94264	Canola	mitochondrion, plasma membrane	40.66	41.62
CDX86866	Canola	mitochondrion, plasma membrane	40.46	40.94
Bra037910.1-P	Field mustard	mitochondrion, plasma membrane	40.46	40.94
CDY05096	Canola	plasma membrane	35.07	40.9
HORVU6Hr1G031360.1	Barley	mitochondrion, plastid	41.43	40.41
CDX99535	Canola	mitochondrion, plasma membrane	40.66	40.19
CDX99538	Canola	plasma membrane	41.04	39.96
Solyc07g014690.2.1	Tomato	plasma membrane	42.2	39.46
CDX90754	Canola	plastid	41.62	36.92
HORVU2Hr1G100450.3	Barley	plastid	41.23	36.77
Bra000707.1-P	Field mustard	plastid	41.43	36.75
HORVU0Hr1G022090.3	Barley	plasma membrane	38.34	36.72
HORVU7Hr1G096920.11	Barley	mitochondrion, plasma membrane	35.26	36.02
HORVU2Hr1G100420.2	Barley	plastid	28.52	27.77

Protein Annotations

EnsemblPlants:HORVU4Hr1G087960.1	EnsemblPlantsGene:HORVU4Hr1G087960	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
GO:GO:0098655	InterPro:Cat_transpt	PANTHER:PTHR31064	PANTHER:PTHR31064:SF13	PFAM:PF02386	SEG:seg
TMHMM:TMhelix	UniParc:UPI000B465F7C	UniProt:A0A287Q0Y5	MapMan:24.2.20	:	:

Description

No Description!

Coordinates

chrchr4H:-:638634849..638636785

Molecular Weight (calculated)

57455.6 Da

IEP (calculated)

9.372

GRAVY (calculated)

0.337

Length

519 amino acids

Sequence
(BLAST)

001: TTLHTTQLGM GSLHVSGSTT TQHSRVQRAY QLLFFHVHPF WPQLLYFVSI SFFGFVMLRA LPMKTNMPTD LDLIFTSVSA TTVSSMQAVE MESFSNPQLL
101: LLTLLMLLGG EVFTSMLGMY FTYVKSKKKE AQAPHDDGAK VKPAPSSLEL TAASICMDDG TAQDRMEQGF KDQPRYGRAF LTRLLLFIVV GYHAVVHPAG
201: YSLMLVYLSV VSGARTVLAG KGISMHTFSV FTIVSTFANC GFMPNNEGMA SFRSFPGLLL LVMPHVLLGN TLFPVFLRLA IWALQRFTKR PELGELRSIG
301: YDHLLTSRHT RFLAFTVAVF VLAQLSLFCA MEWGSDGLRG LTAAQKLVAA LFMSVNSRHA GEMVVDLSTV SSAVVVVYMV MMYLPPYTTF LPVEDSNQQV
401: GTDQKRTSIW HKLLMSPLSC IAIFVVVVCI TERRQISDDP LNFNVLSIAV EVISAYGNVG FSTGYSCGRQ VTPDGSCRDA WVGFSGKWSR EGKLALIAVM
501: FYGRLKKFSM HGGQAWRIV

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.