Factsheet for VIT_11s0103g00130.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0103g00140.t01	Wine grape	plastid	78.06	80.37
VIT_11s0103g00150.t01	Wine grape	plasma membrane	79.32	80.04
VIT_11s0103g00010.t01	Wine grape	plasma membrane, vacuole	39.75	59.57
VIT_11s0103g00090.t01	Wine grape	extracellular, plasma membrane	9.71	58.06
Solyc07g014690.2.1	Tomato	plasma membrane	56.47	56.58
GSMUA_Achr1P23670_001	Banana	plasma membrane, plastid, vacuole	42.27	50.98
VIT_11s0103g00050.t01	Wine grape	plasma membrane	19.96	50.0
TraesCS4D01G361300.1	Wheat	plasma membrane	46.04	49.61
GSMUA_Achr1P23660_001	Banana	plasma membrane	40.29	49.45
TraesCS4B01G376000.1	Wheat	plasma membrane	44.78	49.4
TraesCS4B01G370800.1	Wheat	plasma membrane	45.14	48.46
HORVU4Hr1G087960.1	Barley	golgi, plasma membrane, plastid	44.42	47.59
EES02854	Sorghum	plasma membrane	46.58	47.44
OQU82274	Sorghum	plasma membrane	37.41	47.06
Zm00001d040627_P001	Maize	plasma membrane	43.53	45.23
Os04t0607600-01	Rice	plasma membrane	40.29	44.8
TraesCS2D01G428300.1	Wheat	plasma membrane	35.07	44.02
Os01t0307500-01	Rice	nucleus, peroxisome, plasma membrane	43.7	43.86
Zm00001d002378_P001	Maize	plastid	41.73	43.86
TraesCS2D01G428400.1	Wheat	vacuole	35.07	43.82
TraesCS2B01G451800.1	Wheat	plastid	41.55	41.55
TraesCS2D01G428200.1	Wheat	mitochondrion	41.01	40.5
TraesCS2B01G451300.1	Wheat	mitochondrion	41.01	40.5
HORVU2Hr1G100450.3	Barley	plastid	41.73	39.86
TraesCS2A01G430600.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	41.01	39.18
TraesCS2B01G451400.1	Wheat	plastid	40.29	38.75
TraesCS2B01G451600.1	Wheat	plasma membrane, plastid	39.21	36.95
HORVU2Hr1G100420.2	Barley	plastid	29.5	30.77

Protein Annotations

EntrezGene:100242150	wikigene:100242150	MapMan:24.2.20	ProteinID:CCB62274	ProteinID:CCB62274.1	InterPro:Cat_transpt
UniProt:F6I5Q6	EMBL:FN596751	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0015081
GO:GO:0016020	GO:GO:0016021	GO:GO:0035725	GO:GO:0055085	EntrezGene:LOC100242150	wikigene:LOC100242150
PFAM:PF02386	PANTHER:PTHR31064	PANTHER:PTHR31064:SF20	TMHMM:TMhelix	UniParc:UPI000210AB34	ArrayExpress:VIT_11s0103g00130
EnsemblPlantsGene:VIT_11s0103g00130	EnsemblPlants:VIT_11s0103g00130.t01	RefSeq:XP_002267717	RefSeq:XP_002267717.1	SEG:seg	:

Description

No Description!

Coordinates

chr11:+:15655460..15663113

Molecular Weight (calculated)

62547.3 Da

IEP (calculated)

9.550

GRAVY (calculated)

0.388

Length

556 amino acids

Sequence
(BLAST)

001: MMISASFVGK RLHRLCTCLS FKLECLGRSI WFLVSSFYSL VVLRVNPFWI QLCYFPCLSF QGFLVLKALK PRTYSFRPRN LDLFFTSVSA ATVSSMSTVE
101: MEVFSNNQLL ILTLLMFVGG EVFTSMVELH LRRSKLEKPW IAENKIDSVT SINGSAPLSP GKPFGQVELR VVTVPSTDKY SKLETEQVHR QIEGQTESLS
201: TSESLKYRSI KFLGFVVMGY LVVVHVVGVA LVSAYVALVS SARDVLKQKG LKLFTFSLFT TVSTFASCGF VPTNENMIVF SSNSGLLLII IPQVLLGNTL
301: FPSCLRFSIW TLGKFFNKAE SNYLLMNARE IGFLYLLPSL HSTLLVPTVL GFILIQFTLL CSMDWNSEGL NGLNSYQKII GALFQSVNSR HTGETIVDIS
401: ILSPAILVLF VVMMYLPPYT SFLPIEDYEQ SSPTCSGRRR RKRGKIVENL IFSQLSYLVI FIILICITER KNMKDDPLNF TVLNIVIEVI SAYGNVGFTA
501: GYSCERLMKP DSSCQSKWFG FSGKWSDEGK IILILAMFFG RLKKFNMDGG RAWKLL

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.