Factsheet for TraesCS2D01G428400.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 5
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G428300.1	Wheat	plasma membrane	73.71	74.04
OQU82274	Sorghum	plasma membrane	71.24	71.72
TraesCS2B01G451600.1	Wheat	plasma membrane, plastid	90.56	68.31
Os04t0607600-01	Rice	plasma membrane	66.74	59.4
TraesCS2D01G428200.1	Wheat	mitochondrion	74.61	58.97
Zm00001d002378_P001	Maize	plastid	67.42	56.71
VIT_11s0103g00090.t01	Wine grape	extracellular, plasma membrane	11.46	54.84
VIT_11s0103g00050.t01	Wine grape	plasma membrane	23.37	46.85
VIT_11s0103g00010.t01	Wine grape	plasma membrane, vacuole	38.2	45.82
TraesCS4D01G361300.1	Wheat	plasma membrane	42.7	36.82
AT4G10310.1	Thale cress	plasma membrane	41.57	36.56
KRH74148	Soybean	plasma membrane	42.92	36.45
VIT_11s0103g00140.t01	Wine grape	plastid	43.82	36.11
Bra037912.1-P	Field mustard	plasma membrane	40.22	36.09
CDX86865	Canola	plasma membrane	40.0	35.89
VIT_11s0103g00150.t01	Wine grape	plasma membrane	44.04	35.57
PGSC0003DMT400077052	Potato	endoplasmic reticulum, vacuole	40.0	35.53
CDY25243	Canola	mitochondrion, plasma membrane	40.45	35.5
Bra033189.1-P	Field mustard	mitochondrion, plasma membrane	40.45	35.5
CDX94264	Canola	mitochondrion, plasma membrane	40.22	35.31
TraesCS2D01G428500.1	Wheat	plasma membrane	36.18	35.23
Bra037910.1-P	Field mustard	mitochondrion, plasma membrane	40.45	35.09
CDX86866	Canola	mitochondrion, plasma membrane	40.45	35.09
VIT_11s0103g00130.t01	Wine grape	plasma membrane	43.82	35.07
KRH55676	Soybean	mitochondrion, plasma membrane	44.72	34.67
Solyc07g014680.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	30.34	34.53
KRH25841	Soybean	plasma membrane	43.6	34.52
CDX99535	Canola	mitochondrion, plasma membrane	40.45	34.29
CDY05096	Canola	plasma membrane	32.81	32.81
CDX99538	Canola	plasma membrane	38.88	32.46
TraesCS6D01G144500.1	Wheat	plasma membrane	38.43	32.14
Bra000707.1-P	Field mustard	plastid	40.67	30.94
CDX90754	Canola	plastid	40.45	30.77
Solyc07g014690.2.1	Tomato	plasma membrane	38.2	30.63
TraesCS7D01G411300.1	Wheat	plasma membrane	34.83	30.51
TraesCS7D01G411200.1	Wheat	mitochondrion, plasma membrane	36.4	30.51
KRH49067	Soybean	plasma membrane	27.64	30.0

Protein Annotations

EnsemblPlants:TraesCS2D01G428400.1	EnsemblPlantsGene:TraesCS2D01G428400	GO:GO:0003674	GO:GO:0005215	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0055085	InterPro:Cat_transpt	PANTHER:PTHR31064	PANTHER:PTHR31064:SF7
PFAM:PF02386	SEG:seg	TMHMM:TMhelix	MapMan:24.2.20	:	:

Description

No Description!

Coordinates

chr2D:+:540190245..540196142

Molecular Weight (calculated)

48512.0 Da

IEP (calculated)

8.199

GRAVY (calculated)

0.218

Length

445 amino acids

Sequence
(BLAST)

001: MSAVEMEVFS DGQLFVLTVL MFTGGEVFVS LVGLASKWSK LRKQGTISIS QRVESHDDEG VELETTPQVA NATDTDSWTR NSDETSKSPI DAKRLRREAV
101: RSLSLVVLAI VVAAHVLGGA AIAAYVYASP GARRTLRSKA LGVWTFAVFT TVSTFSNCGF MPNNENMAAF RRDTGLQLLL VPLALSGNTL FPTLLAVCVR
201: AAAEATRRPE LVEMTARNGR ELTGYYHLLP ARRCAMLAAT VAGLVAVQVC MVCGMEWGGA LRGMGPWEKV SNALFVAVNS RHTGESTLDL STLAPAILVL
301: FVLMMYLPPY TTWFPFEESS GVKDHPTEET QGSRLLKSTA LSQLSYLAIF IIAICITERE NLEEDPLNFS LLSIVVEVAS AYGNVGFSMG YSCSRQISPD
401: RLCTDRWTGF VGRWSDSGKL ILILVMLFGR LKKFGMKGGK AWKLG

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.