CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 2
mitochondrion 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037910.1-P	Field mustard	mitochondrion, plasma membrane	96.3	96.3
CDX99535	Canola	mitochondrion, plasma membrane	94.35	92.19
CDX86865	Canola	plasma membrane	73.29	75.81
AT4G10310.1	Thale cress	plasma membrane	73.1	74.11
CDY25243	Canola	mitochondrion, plasma membrane	70.57	71.4
CDX94264	Canola	mitochondrion, plasma membrane	70.37	71.2
CDY05096	Canola	plasma membrane	61.6	71.01
CDX99538	Canola	plasma membrane	69.01	66.42
CDX90754	Canola	plastid	68.62	60.17
PGSC0003DMT400077052	Potato	endoplasmic reticulum, vacuole	45.81	46.91
KRH49067	Soybean	plasma membrane	36.84	46.1
KRH74148	Soybean	plasma membrane	46.98	45.99
GSMUA_Achr1P23670_001	Banana	plasma membrane, plastid, vacuole	40.74	45.34
Solyc07g014680.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	34.5	45.27
VIT_11s0103g00050.t01	Wine grape	plasma membrane	19.49	45.05
KRH25841	Soybean	plasma membrane	49.12	44.84
TraesCS4B01G370800.1	Wheat	plasma membrane	43.66	43.24
TraesCS4B01G376000.1	Wheat	plasma membrane	42.11	42.86
KRH55676	Soybean	mitochondrion, plasma membrane	47.76	42.68
TraesCS4D01G361300.1	Wheat	plasma membrane	42.69	42.44
GSMUA_Achr1P23660_001	Banana	plasma membrane	37.43	42.38
OQU82274	Sorghum	plasma membrane	36.06	41.86
Solyc07g014690.2.1	Tomato	plasma membrane	45.22	41.8
Os04t0607600-01	Rice	plasma membrane	40.16	41.2
HORVU4Hr1G087960.1	Barley	golgi, plasma membrane, plastid	40.94	40.46
TraesCS2D01G428400.1	Wheat	vacuole	35.09	40.45
TraesCS2D01G428300.1	Wheat	plasma membrane	34.89	40.41
EES02854	Sorghum	plasma membrane	41.52	39.01
Os01t0307500-01	Rice	nucleus, peroxisome, plasma membrane	41.72	38.63
Zm00001d002378_P001	Maize	plastid	39.18	38.0
Zm00001d040627_P001	Maize	plasma membrane	39.57	37.94
TraesCS2B01G451800.1	Wheat	plastid	39.57	36.51
TraesCS2D01G428200.1	Wheat	mitochondrion	39.38	35.88
TraesCS2B01G451300.1	Wheat	mitochondrion	39.18	35.7
TraesCS2B01G451400.1	Wheat	plastid	39.96	35.47
TraesCS2A01G430600.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	39.96	35.22
HORVU2Hr1G100450.3	Barley	plastid	39.57	34.88
TraesCS2B01G451600.1	Wheat	plasma membrane, plastid	38.79	33.73
HORVU2Hr1G100420.2	Barley	plastid	29.04	27.95

Protein Annotations

EnsemblPlants:CDX86866	EnsemblPlantsGene:GSBRNA2T00145635001	GO:A0A078DC82	GO:GO:0003674	GO:GO:0005215	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0055085	InterPro:Cat_transpt	PANTHER:PTHR31064
PANTHER:PTHR31064:SF20	PFAM:PF02386	ProteinID:CDX86866	ProteinID:CDX86866.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EE6C08	MapMan:24.2.20	:	:	:	:

Description

BnaA09g22560D

Coordinates

chrLK031847:-:1442032..1446598

Molecular Weight (calculated)

58854.4 Da

IEP (calculated)

9.970

GRAVY (calculated)

0.270

Length

513 amino acids

Sequence
(BLAST)

001: MERVLAQLAK IRLQLAKFRS PFFIYFFYFF SFSLLGFLAL KVSKPRTTSR PHDLDLFFTS VSAITVSSMS TIDMEVFSNT QLIIITILMF LGGEVFTSFL
101: DLYFSHFSNF VFPHSKIRHL TGSLNIKPPT EDRRRDLENI TDHLKRPSQI NERASKYLYS VVLGYHLVTN LAGSVLVLVY VTFVKTAKVV LSSKEISPVT
201: FSIFTTVSTF GNCGFVPTKE NMVIFRKNSG LLWLLIPQIF MGNTLFPCFL FLLIWGLDKI TKREEFGYIL KNHKTMGYSH LLSLRLCVLL GLTVLGFVMI
301: QFFVFCTFEW NSVSLEGMNP YEKLVGSLFQ VVNSRHTGEN IVDLSTLSPA ILWNKLFLAM NFNTFSLKRY LPPYTLFMPL TTIKKYKEEV EDHAGNEEKR
401: KKTGFFVSQL SFLAICVFFI SITESQNLRR DPLNFNILNI TLEVISAFGN VGFTTGYSCK RCLDINNGSC KDTSYGFVGR WSPNGKFILI IVMFYGRFKQ
501: FTAKSGRPWI LYP

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.