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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:endoplasmic reticulum, peroxisome, plasma membrane
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G451300.1 Wheat mitochondrion 91.07 94.14
TraesCS2D01G428200.1 Wheat mitochondrion 86.6 89.52
HORVU2Hr1G100450.3 Barley plastid 81.79 81.79
OQU82274 Sorghum plasma membrane 56.87 74.89
Os04t0607600-01 Rice plasma membrane 58.76 68.4
Zm00001d002378_P001 Maize plastid 61.34 67.49
HORVU2Hr1G100420.2 Barley plastid 61.51 67.17
VIT_11s0103g00090.t01 Wine grape extracellular, plasma membrane 8.93 55.91
VIT_11s0103g00010.t01 Wine grape plasma membrane, vacuole 31.1 48.79
VIT_11s0103g00050.t01 Wine grape plasma membrane 17.35 45.5
VIT_11s0103g00140.t01 Wine grape plastid 40.03 43.15
AT4G10310.1 Thale cress plasma membrane 37.11 42.69
Solyc07g014680.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 28.52 42.46
Bra033189.1-P Field mustard mitochondrion, plasma membrane 36.94 42.41
CDY25243 Canola mitochondrion, plasma membrane 36.94 42.41
KRH74148 Soybean plasma membrane 37.63 41.79
VIT_11s0103g00150.t01 Wine grape plasma membrane 39.52 41.74
Bra037912.1-P Field mustard plasma membrane 35.4 41.53
CDX94264 Canola mitochondrion, plasma membrane 36.08 41.42
CDX86865 Canola plasma membrane 35.05 41.13
PGSC0003DMT400077052 Potato endoplasmic reticulum, vacuole 35.4 41.12
VIT_11s0103g00130.t01 Wine grape plasma membrane 39.18 41.01
KRH25841 Soybean plasma membrane 39.52 40.93
KRH55676 Soybean mitochondrion, plasma membrane 40.21 40.77
CDX86866 Canola mitochondrion, plasma membrane 35.22 39.96
Bra037910.1-P Field mustard mitochondrion, plasma membrane 35.05 39.77
CDY05096 Canola plasma membrane 30.07 39.33
CDX99535 Canola mitochondrion, plasma membrane 35.22 39.05
KRH49067 Soybean plasma membrane 26.8 38.05
CDX99538 Canola plasma membrane 34.19 37.34
CDX90754 Canola plastid 37.46 37.27
Bra000707.1-P Field mustard plastid 37.29 37.09
TraesCS7A01G418200.1 Wheat plasma membrane 28.52 36.32
Solyc07g014690.2.1 Tomato plasma membrane 34.54 36.22
TraesCS7A01G418600.1 Wheat plasma membrane 29.9 34.25
TraesCS7A01G418500.1 Wheat plasma membrane 31.44 33.64
Protein Annotations
MapMan:24.2.20InterPro:Cat_transptGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0006812GO:GO:0006813GO:GO:0006814GO:GO:0006950
GO:GO:0006970GO:GO:0008150GO:GO:0008324GO:GO:0009628GO:GO:0009651GO:GO:0016020
GO:GO:0055085PFAM:PF02386PANTHER:PTHR31064PANTHER:PTHR31064:SF7TMHMM:TMhelixEnsemblPlantsGene:TraesCS2A01G430600
EnsemblPlants:TraesCS2A01G430600.1SEG:seg::::
Description
No Description!
Coordinates
chr2A:+:683567488..683578342
Molecular Weight (calculated)
64575.2 Da
IEP (calculated)
10.239
GRAVY (calculated)
0.186
Length
582 amino acids
Sequence
(BLAST)
001: MHAHPDASTQ YRVDITTSNM AGARHKVGEL LRHARRRSTA ALDKALSLLS SHSWSYVQHH VVKERVKRWR HALAGRFWRR LGSLLVHVAY FLAVSWLGYL
101: LLAQLRFRAG GDGTRRPRGI DLFFTAVSAA TVSSMSTVEM EVFSNGQLLV LTVLMFVGGE VFLSLLGLAS KWSKLRKQAV HKSSRRVDNH DVPELEMPPV
201: DAATELANPT SMTSTVDDEM SKPLDHFDDT RLRRDAVLSL FFVVLAILLA VHVLGSGAIV AYVLHASPAA RRTLRDKALN MWTFAVFTTV STFSSCGYMP
301: TNENMIVFKR DTGLQLLLVP QALVGNTLFP PLLAACVRVA AAATRRVELK ETAKKGRELT GYYHLLPARR CAMLAATVVG FLAVQVAMLC GMEWGGALRG
401: MSAWEKVSNA VFLAVNSRHT GESTLDLFTL APAILVLFVL MMYLPPYTTW FPFEESSGVK DQPREETQGV RLLKSTLLSQ LSYLAIFVIA ICITEREKLK
501: EDPLNFNLLS IVVEVVSAYG NVGFSMGYSC SRQISPDGMC TDRWTGFAGR WSDSGKLILI LVMLFGRMKK FSMKAGKAWK LS
Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.