Factsheet for TraesCS2B01G451300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G430600.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	94.14	91.07
TraesCS2D01G428200.1	Wheat	mitochondrion	87.21	87.21
TraesCS2B01G451800.1	Wheat	plastid	77.8	78.78
TraesCS2B01G451400.1	Wheat	plastid	79.75	77.68
OQU82274	Sorghum	plasma membrane	58.61	74.66
Os04t0607600-01	Rice	plasma membrane	60.75	68.4
Zm00001d002378_P001	Maize	plastid	62.88	66.92
TraesCS2B01G451600.1	Wheat	plasma membrane, plastid	67.5	64.41
VIT_11s0103g00090.t01	Wine grape	extracellular, plasma membrane	9.41	56.99
VIT_11s0103g00010.t01	Wine grape	plasma membrane, vacuole	32.15	48.79
VIT_11s0103g00050.t01	Wine grape	plasma membrane	18.83	47.75
Solyc07g014680.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	29.66	42.71
VIT_11s0103g00140.t01	Wine grape	plastid	40.85	42.59
AT4G10310.1	Thale cress	plasma membrane	37.48	41.7
Bra033189.1-P	Field mustard	mitochondrion, plasma membrane	37.48	41.62
CDY25243	Canola	mitochondrion, plasma membrane	37.48	41.62
TraesCS4B01G376000.1	Wheat	plasma membrane	37.12	41.47
KRH74148	Soybean	plasma membrane	38.54	41.41
VIT_11s0103g00150.t01	Wine grape	plasma membrane	40.5	41.38
TraesCS4B01G370800.1	Wheat	plasma membrane	37.83	41.12
PGSC0003DMT400077052	Potato	endoplasmic reticulum, vacuole	36.59	41.12
CDX94264	Canola	mitochondrion, plasma membrane	36.94	41.03
VIT_11s0103g00130.t01	Wine grape	plasma membrane	40.5	41.01
KRH25841	Soybean	plasma membrane	40.85	40.93
Bra037912.1-P	Field mustard	plasma membrane	35.52	40.32
KRH55676	Soybean	mitochondrion, plasma membrane	41.03	40.24
CDX86865	Canola	plasma membrane	35.17	39.92
CDX86866	Canola	mitochondrion, plasma membrane	35.7	39.18
Bra037910.1-P	Field mustard	mitochondrion, plasma membrane	35.52	38.99
CDY05096	Canola	plasma membrane	30.73	38.88
CDX99535	Canola	mitochondrion, plasma membrane	35.52	38.1
KRH49067	Soybean	plasma membrane	27.35	37.56
TraesCS6B01G182600.1	Wheat	mitochondrion, plasma membrane	35.17	37.22
CDX99538	Canola	plasma membrane	34.81	36.77
CDX90754	Canola	plastid	37.83	36.41
Bra000707.1-P	Field mustard	plastid	37.66	36.24
Solyc07g014690.2.1	Tomato	plasma membrane	35.7	36.22
TraesCS7B01G318800.1	Wheat	plasma membrane	30.91	34.25
TraesCS7B01G318400.1	Wheat	plasma membrane	33.04	34.19
TraesCS7B01G318700.1	Wheat	plasma membrane	32.68	33.82
TraesCS2B01G451700.3	Wheat	plasma membrane	31.97	31.25

Protein Annotations

EnsemblPlants:TraesCS2B01G451300.1	EnsemblPlantsGene:TraesCS2B01G451300	GO:GO:0003674	GO:GO:0005215	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0055085	InterPro:Cat_transpt	PANTHER:PTHR31064	PANTHER:PTHR31064:SF7
PFAM:PF02386	SEG:seg	TMHMM:TMhelix	MapMan:24.2.20	:	:

Description

No Description!

Coordinates

chr2B:+:644549042..644553224

Molecular Weight (calculated)

62405.5 Da

IEP (calculated)

10.084

GRAVY (calculated)

0.222

Length

563 amino acids

Sequence
(BLAST)

001: MAGARHKVGE LLRHARRRST AALDKALSLL SSPSWSYVQH HVVKERVARW RRALAGRFWR RLGSLLVHVA YFLAVSWLGY LLLAQLRFRA GSDGTRRPRG
101: MDLFFTAVSA ATVSSMSTVE MEVFSNGQLV VLTTLMFVGG EVFLSLLGLA SKWSKLRKQT VHKSSRRVDN HDVPELEMPP VDAATELDNP TSMTSTVDDE
201: MSKPLDHFDD TRLRRDAVLS LFFVVLAILL AVHVLGAGAI VAYIVHASPA ARRTLRDKAL NVWTFAVFTT VSTFSSCGYM PTNENMIVFK RDTGLQLLLV
301: TQALVGNTLF PPLLAACVRV AAAATRRVEL KETAKKGREL TGYYHLLPAR RCAMLAATVV GFLAVQVAML CGMEWGGALR GMSPWEKVSN AVFLAVNSRH
401: TGESTLDLCT LAPAVLVLFV LMMYLPPYTT WFPFEESSGV KDHPTEETQG ARLLKSTLLS QLSYLVIFVI AICITEREKL KEDPLNFNLL SIVVEVVSAY
501: GNVGFSMGYS CSRQISPDGM CTDRWTGFAG RWSDSGKLIL ILVMLFGRLK KFSMYTGKAW KLS

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.