Factsheet for TraesCS2B01G451400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G100450.3	Barley	plastid	82.53	81.96
TraesCS2B01G451300.1	Wheat	mitochondrion	77.68	79.75
OQU82274	Sorghum	plasma membrane	57.27	74.89
TraesCS2B01G451800.1	Wheat	plastid	71.97	74.82
Os04t0607600-01	Rice	plasma membrane	60.21	69.6
Zm00001d002378_P001	Maize	plastid	61.94	67.67
HORVU2Hr1G100420.2	Barley	plastid	61.42	66.6
TraesCS2B01G451600.1	Wheat	plasma membrane, plastid	66.78	65.42
VIT_11s0103g00090.t01	Wine grape	extracellular, plasma membrane	8.65	53.76
VIT_11s0103g00010.t01	Wine grape	plasma membrane, vacuole	30.62	47.71
VIT_11s0103g00050.t01	Wine grape	plasma membrane	17.3	45.05
Solyc07g014680.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	28.89	42.71
VIT_11s0103g00140.t01	Wine grape	plastid	39.79	42.59
TraesCS4B01G376000.1	Wheat	plasma membrane	36.85	42.26
KRH74148	Soybean	plasma membrane	38.24	42.18
AT4G10310.1	Thale cress	plasma membrane	36.85	42.09
CDY25243	Canola	mitochondrion, plasma membrane	36.68	41.81
Bra033189.1-P	Field mustard	mitochondrion, plasma membrane	36.68	41.81
TraesCS4B01G370800.1	Wheat	plasma membrane	37.37	41.7
VIT_11s0103g00150.t01	Wine grape	plasma membrane	39.62	41.56
PGSC0003DMT400077052	Potato	endoplasmic reticulum, vacuole	35.99	41.52
KRH25841	Soybean	plasma membrane	39.97	41.1
CDX94264	Canola	mitochondrion, plasma membrane	35.99	41.03
KRH55676	Soybean	mitochondrion, plasma membrane	40.48	40.77
Bra037912.1-P	Field mustard	plasma membrane	34.95	40.73
CDX86865	Canola	plasma membrane	34.6	40.32
VIT_11s0103g00130.t01	Wine grape	plasma membrane	38.75	40.29
CDX86866	Canola	mitochondrion, plasma membrane	35.47	39.96
Bra037910.1-P	Field mustard	mitochondrion, plasma membrane	35.29	39.77
CDY05096	Canola	plasma membrane	29.93	38.88
CDX99535	Canola	mitochondrion, plasma membrane	35.29	38.86
KRH49067	Soybean	plasma membrane	26.82	37.8
TraesCS6B01G182600.1	Wheat	mitochondrion, plasma membrane	34.26	37.22
CDX99538	Canola	plasma membrane	33.91	36.77
Solyc07g014690.2.1	Tomato	plasma membrane	35.12	36.58
CDX90754	Canola	plastid	36.33	35.9
Bra000707.1-P	Field mustard	plastid	36.16	35.73
TraesCS7B01G318800.1	Wheat	plasma membrane	30.28	34.45
TraesCS7B01G318400.1	Wheat	plasma membrane	32.18	34.19
TraesCS7B01G318700.1	Wheat	plasma membrane	32.01	34.01
TraesCS2B01G451700.3	Wheat	plasma membrane	31.83	31.94

Protein Annotations

EnsemblPlants:TraesCS2B01G451400.1	EnsemblPlantsGene:TraesCS2B01G451400	GO:GO:0003674	GO:GO:0005215	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0055085	InterPro:Cat_transpt	PANTHER:PTHR31064	PANTHER:PTHR31064:SF7
PFAM:PF02386	SEG:seg	TMHMM:TMhelix	MapMan:24.2.20	:	:

Description

No Description!

Coordinates

chr2B:+:644844388..644847978

Molecular Weight (calculated)

63314.2 Da

IEP (calculated)

9.888

GRAVY (calculated)

0.198

Length

578 amino acids

Sequence
(BLAST)

001: MHPNTSTHTY SDSSTSNMAG AHRKVRELLE HTRRRSTAAL NNVMSLMRSL SGSYAQHHVK ERVARWRRAL AGRLSPRLGS LLVHVAYFLA VSWLGYLVLA
101: QLRFRAGGEG TRRPGAIDLF FTAVSAATVS SMSTVEMEAF SNGQLLVLTV LMFVGGEVFL SLLGLASKWS KLRKQAVRKS RRVEIHDVAE LEMPPVAAAG
201: EFDNPTSITS TADDEMSKPL DRFDDTRLRR DAVLSLFFVV LAILLTVHVV GAVAVAAYIL HASPAARRTL REKALNEWTF AVFTTVSTFS SCGYMPTNEN
301: MAVFKRDTGL QLLLVPQALV GNTLFPPLLA ACVRAAAAAT RRVELKETAK EGGELTGYYH LLPARRCAML AATVAGFVAV QAAMLCGMEW GGALSGMSAW
401: EKVSNAVFLA VNSRHTGETT LDLSTLAPAI LVLFVLMMYL PPYTTWFPFG ESSSVKDHPT EETQGVRLLK STLLSQLSYL AIFVIAICVT EREKLKEDPL
501: NFNLLSIVVE VVSAYGNVGF SMGYSCSRQI SPDGMCTDRW TGFAGRWSDS GKLILILVML FGRLKKFSMN AGKAWKLS

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.