Factsheet for VIT_11s0103g00140.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0103g00150.t01	Wine grape	plasma membrane	91.48	89.66
VIT_11s0103g00130.t01	Wine grape	plasma membrane	80.37	78.06
VIT_11s0103g00010.t01	Wine grape	plasma membrane, vacuole	41.11	59.84
VIT_11s0103g00090.t01	Wine grape	extracellular, plasma membrane	10.19	59.14
Solyc07g014690.2.1	Tomato	plasma membrane	56.67	55.14
GSMUA_Achr1P23670_001	Banana	plasma membrane, plastid, vacuole	43.33	50.76
TraesCS4B01G376000.1	Wheat	plasma membrane	45.93	49.21
TraesCS4D01G361300.1	Wheat	plasma membrane	46.67	48.84
VIT_11s0103g00050.t01	Wine grape	plasma membrane	20.0	48.65
GSMUA_Achr1P23660_001	Banana	plasma membrane	40.19	47.9
TraesCS4B01G370800.1	Wheat	plasma membrane	45.56	47.49
HORVU4Hr1G087960.1	Barley	golgi, plasma membrane, plastid	45.0	46.82
OQU82274	Sorghum	plasma membrane	38.15	46.61
TraesCS2D01G428300.1	Wheat	plasma membrane	37.59	45.82
EES02854	Sorghum	plasma membrane	46.11	45.6
Zm00001d002378_P001	Maize	plastid	43.52	44.42
Os04t0607600-01	Rice	plasma membrane	40.74	44.0
TraesCS2D01G428400.1	Wheat	vacuole	36.11	43.82
Os01t0307500-01	Rice	nucleus, peroxisome, plasma membrane	44.63	43.5
Zm00001d040627_P001	Maize	plasma membrane	42.96	43.36
TraesCS2B01G451800.1	Wheat	plastid	44.63	43.35
TraesCS2D01G428200.1	Wheat	mitochondrion	43.89	42.1
TraesCS2B01G451300.1	Wheat	mitochondrion	42.59	40.85
HORVU2Hr1G100450.3	Barley	plastid	43.33	40.21
TraesCS2A01G430600.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	43.15	40.03
TraesCS2B01G451400.1	Wheat	plastid	42.59	39.79
TraesCS2B01G451600.1	Wheat	plasma membrane, plastid	41.11	37.63
HORVU2Hr1G100420.2	Barley	plastid	30.74	31.14

Protein Annotations

MapMan:24.2.20	ProteinID:CBI40133	ProteinID:CBI40133.3	InterPro:Cat_transpt	UniProt:D7UBL8	EMBL:FN596751
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0015081	GO:GO:0016020	GO:GO:0016021
GO:GO:0035725	GO:GO:0055085	PFAM:PF02386	PANTHER:PTHR31064	PANTHER:PTHR31064:SF20	TMHMM:TMhelix
UniParc:UPI0001BE5290	ArrayExpress:VIT_11s0103g00140	EnsemblPlantsGene:VIT_11s0103g00140	EnsemblPlants:VIT_11s0103g00140.t01	SEG:seg	:

Description

No Description!

Coordinates

chr11:+:15685410..15689385

Molecular Weight (calculated)

60844.6 Da

IEP (calculated)

10.123

GRAVY (calculated)

0.412

Length

540 amino acids

Sequence
(BLAST)

001: MMNSASFTGN KLHRLCTCSS FKLECLGRSI CFLASSFYRF VILRFNTFLV QLCYFLCLSF QGFWVLKALK PRTPLRPRNL DLFFTSVSAA TVSSMSTVEM
101: EVFSNNQLLI LTLLMFVGGE IFTSMVELQL WRSKLKKPLI AENQVNSVSN NSSAPPDPRN PFGQFELRVG RTKSLSSESL KYHSIKFLGF VVMGYLVVVH
201: VLGVTLVSAY IALVSSARDV LKQKGLKLFT FSLFTTVSTL ASCGFVPTNE NMIVFSKNSG LLLIIIPQVL LGNTLFPSCL RFSIWTLGKF KKVESNYLLI
301: STREIGFLHL LPSLHSTLLV PTVLGFILIQ FTLFCSMEWN SEGLNGLNSY QKIIGALFQS VNSRHTGETI VDISTLSPAI LVLVVVMMYL PPYTSFLPIK
401: EICNGGRKRR RGKIVENLIF SQLSYLAIFI ILICITERKK MKDDPLNFTV LNIVIEVISL QDQYLSSLKR IQFLVAYGNV GFTAGYSCER LLKPDSSCQS
501: KWFGFSGKWS DEGKIILIFV MFFGRLKKFN MDGGRAWKLL

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.