Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- extracellular 3
- plasma membrane 5
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0103g00090.t01 | Wine grape | extracellular, plasma membrane | 24.32 | 58.06 |
| VIT_11s0103g00010.t01 | Wine grape | plasma membrane, vacuole | 52.7 | 31.54 |
| OQU82274 | Sorghum | plasma membrane | 47.75 | 23.98 |
| TraesCS2D01G428400.1 | Wheat | vacuole | 46.85 | 23.37 |
| TraesCS2D01G428300.1 | Wheat | plasma membrane | 44.59 | 22.35 |
| Os04t0607600-01 | Rice | plasma membrane | 48.2 | 21.4 |
| GSMUA_Achr1P23670_001 | Banana | plasma membrane, plastid, vacuole | 43.69 | 21.04 |
| Bra037912.1-P | Field mustard | plasma membrane | 46.85 | 20.97 |
| CDX86865 | Canola | plasma membrane | 46.4 | 20.77 |
| HORVU4Hr1G087960.1 | Barley | golgi, plasma membrane, plastid | 47.75 | 20.42 |
| AT4G10310.1 | Thale cress | plasma membrane | 45.95 | 20.16 |
| VIT_11s0103g00150.t01 | Wine grape | plasma membrane | 50.0 | 20.15 |
| TraesCS4B01G370800.1 | Wheat | plasma membrane | 46.85 | 20.08 |
| TraesCS4B01G376000.1 | Wheat | plasma membrane | 45.5 | 20.04 |
| VIT_11s0103g00140.t01 | Wine grape | plastid | 48.65 | 20.0 |
| VIT_11s0103g00130.t01 | Wine grape | plasma membrane | 50.0 | 19.96 |
| TraesCS4D01G361300.1 | Wheat | plasma membrane | 45.95 | 19.77 |
| Bra033189.1-P | Field mustard | mitochondrion, plasma membrane | 44.59 | 19.53 |
| CDY25243 | Canola | mitochondrion, plasma membrane | 44.59 | 19.53 |
| CDX86866 | Canola | mitochondrion, plasma membrane | 45.05 | 19.49 |
| Zm00001d002378_P001 | Maize | plastid | 46.4 | 19.47 |
| CDX94264 | Canola | mitochondrion, plasma membrane | 44.14 | 19.33 |
| Bra037910.1-P | Field mustard | mitochondrion, plasma membrane | 44.14 | 19.1 |
| CDX99535 | Canola | mitochondrion, plasma membrane | 44.59 | 18.86 |
| TraesCS2B01G451300.1 | Wheat | mitochondrion | 47.75 | 18.83 |
| CDX99538 | Canola | plasma membrane | 45.05 | 18.76 |
| TraesCS2B01G451800.1 | Wheat | plastid | 46.85 | 18.7 |
| Os01t0307500-01 | Rice | nucleus, peroxisome, plasma membrane | 45.5 | 18.23 |
| EES02854 | Sorghum | plasma membrane | 44.14 | 17.95 |
| GSMUA_Achr1P23660_001 | Banana | plasma membrane | 36.49 | 17.88 |
| TraesCS2D01G428200.1 | Wheat | mitochondrion | 44.59 | 17.58 |
| Zm00001d040627_P001 | Maize | plasma membrane | 41.89 | 17.38 |
| TraesCS2A01G430600.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 45.5 | 17.35 |
| HORVU2Hr1G100450.3 | Barley | plastid | 45.5 | 17.35 |
| TraesCS2B01G451400.1 | Wheat | plastid | 45.05 | 17.3 |
| CDX90754 | Canola | plastid | 45.05 | 17.09 |
| Bra000707.1-P | Field mustard | plastid | 45.05 | 17.09 |
| TraesCS2B01G451600.1 | Wheat | plasma membrane, plastid | 45.05 | 16.95 |
| CDY05096 | Canola | plasma membrane | 31.98 | 15.96 |
| HORVU2Hr1G100420.2 | Barley | plastid | 24.32 | 10.13 |
Protein Annotations
| EntrezGene:100255707 | wikigene:100255707 | MapMan:24.2.20 | ProteinID:CBI40140 | ProteinID:CBI40140.3 | InterPro:Cat_transpt |
| UniProt:D7UBM5 | EMBL:FN596751 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 | GO:GO:0015081 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0035725 | GO:GO:0055085 | GO:GO:0098655 | EntrezGene:LOC100255707 |
| wikigene:LOC100255707 | PFAM:PF02386 | PANTHER:PTHR31064 | PANTHER:PTHR31064:SF20 | TMHMM:TMhelix | UniParc:UPI0001BE5296 |
| ArrayExpress:VIT_11s0103g00050 | EnsemblPlantsGene:VIT_11s0103g00050 | EnsemblPlants:VIT_11s0103g00050.t01 | RefSeq:XP_002268082 | RefSeq:XP_002268082.1 | SEG:seg |
Description
No Description!
Coordinates
chr11:+:15427916..15429288
Molecular Weight (calculated)
25084.0 Da
IEP (calculated)
8.315
GRAVY (calculated)
0.420
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNNSREIGY NYLLPSVHSF VMAIVVLVLI VFEFLFFCSM EWNSEALYGL DGNEKFVASL FQVVNLRHTG ESVFDLSIVT PAVLVVFIVM MYLPARTSFF
101: AIEGHETDVK NGEGKTKQKR LMGHDTFSPL TFLVPFVIFI CMTERDKLKE DPLNFNVLSI ALEVISAYAN VGLSTGYHCA RQLKPDPFCK PVWYGFVGRW
201: SAGGKLLLVI VMFLGKLRKF GK
101: AIEGHETDVK NGEGKTKQKR LMGHDTFSPL TFLVPFVIFI CMTERDKLKE DPLNFNVLSI ALEVISAYAN VGLSTGYHCA RQLKPDPFCK PVWYGFVGRW
201: SAGGKLLLVI VMFLGKLRKF GK
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.