CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000707.1-P	Field mustard	plastid	98.97	98.97
CDY05096	Canola	plasma membrane	65.13	85.62
AT4G10310.1	Thale cress	plasma membrane	62.56	72.33
CDX86865	Canola	plasma membrane	59.32	69.96
CDY25243	Canola	mitochondrion, plasma membrane	60.17	69.43
CDX86866	Canola	mitochondrion, plasma membrane	60.17	68.62
CDX94264	Canola	mitochondrion, plasma membrane	57.95	66.86
CDX99535	Canola	mitochondrion, plasma membrane	59.49	66.29
CDX99538	Canola	plasma membrane	56.07	61.54
PGSC0003DMT400077052	Potato	endoplasmic reticulum, vacuole	39.15	45.71
VIT_11s0103g00050.t01	Wine grape	plasma membrane	17.09	45.05
KRH74148	Soybean	plasma membrane	40.17	44.85
Solyc07g014680.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	29.4	43.99
GSMUA_Achr1P23670_001	Banana	plasma membrane, plastid, vacuole	34.53	43.82
OQU82274	Sorghum	plasma membrane	32.48	42.99
TraesCS4B01G370800.1	Wheat	plasma membrane	37.95	42.86
TraesCS4D01G361300.1	Wheat	plasma membrane	37.78	42.83
Solyc07g014690.2.1	Tomato	plasma membrane	40.34	42.52
TraesCS4B01G376000.1	Wheat	plasma membrane	36.58	42.46
KRH25841	Soybean	plasma membrane	40.0	41.64
HORVU4Hr1G087960.1	Barley	golgi, plasma membrane, plastid	36.92	41.62
TraesCS2D01G428300.1	Wheat	plasma membrane	31.28	41.31
GSMUA_Achr1P23660_001	Banana	plasma membrane	31.45	40.62
Os04t0607600-01	Rice	plasma membrane	34.7	40.6
KRH49067	Soybean	plasma membrane	28.38	40.49
TraesCS2D01G428400.1	Wheat	vacuole	30.77	40.45
KRH55676	Soybean	mitochondrion, plasma membrane	39.66	40.42
Zm00001d040627_P001	Maize	plasma membrane	35.73	39.07
EES02854	Sorghum	plasma membrane	36.24	38.83
Zm00001d002378_P001	Maize	plastid	35.04	38.75
Os01t0307500-01	Rice	nucleus, peroxisome, plasma membrane	36.58	38.63
TraesCS2B01G451300.1	Wheat	mitochondrion	36.41	37.83
TraesCS2A01G430600.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	37.27	37.46
TraesCS2B01G451800.1	Wheat	plastid	35.21	37.05
TraesCS2D01G428200.1	Wheat	mitochondrion	35.38	36.77
TraesCS2B01G451400.1	Wheat	plastid	35.9	36.33
HORVU2Hr1G100450.3	Barley	plastid	35.73	35.91
TraesCS2B01G451600.1	Wheat	plasma membrane, plastid	35.04	34.75
HORVU2Hr1G100420.2	Barley	plastid	25.64	28.14

Protein Annotations

EnsemblPlants:CDX90754	EnsemblPlantsGene:GSBRNA2T00151447001	GO:A0A078DQM1	GO:GO:0003674	GO:GO:0005215	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0055085	InterPro:Cat_transpt	PANTHER:PTHR31064
PANTHER:PTHR31064:SF20	PFAM:PF02386	ProteinID:CDX90754	ProteinID:CDX90754.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EF1CF1	MapMan:24.2.20	:	:	:	:

Description

BnaA03g24340D

Coordinates

chrLK031864:+:324620..330856

Molecular Weight (calculated)

65840.5 Da

IEP (calculated)

10.263

GRAVY (calculated)

0.089

Length

585 amino acids

Sequence
(BLAST)

001: MTHGAVGSSS AASSAANRLH QENRGRFATC SHKRKQATPP SKEAQWSFVQ HGKNTTGGSG QARSMFQMRE MISGGTISLK RIYSRNSTRL VISIVGYQYH
101: KKPKENSQDR NNGLGFLALK VSKPRATSRL HDLDIFFTSV SAITVSSMST VDMEVFSNTQ LIIITILMFI GGPIFTSFFN IYLSHFTKFV FPHSKIKHLI
201: GSFKADHTIE DRHLDQENIN DRHEIPSQIN EKASKCLYLV VIGYHLVTNI AGSMLLLVYV SFVKTARDVL RFKEISTLTF SIFTTVSTFA TCGFVPTNEN
301: MIIFRKNSGL LWLLIPLVLM GNTLFPCFLR LLIWGLSKTT KREEFGYILK NRKKMGYSHL LSVRLCVFLG LTVLGFILIQ LFLFCTFAWS SESLAGMNWY
401: EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LIVFILMMYL PPYTLFMPFT IKKKNKKEEE NDSGYEKGGK KSGLLVSQLS FLVICIFLIS ITERQKLRRD
501: PLNFNVLNIT LEVVSAYGNV GFTTGYSCER RLNVSDGGCE DAGYGFAGRW SSSGKFILII VMFYGRLKQF TAKSGRAWIL YPSSS

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.