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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • plastid 4
  • endoplasmic reticulum 4
  • plasma membrane 4
  • extracellular 3
  • vacuole 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g014680.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 66.87 85.68
VIT_11s0103g00010.t01 Wine grape plasma membrane, vacuole 39.32 53.1
AT4G10310.1 Thale cress plasma membrane 47.51 47.04
Bra037912.1-P Field mustard plasma membrane 46.51 46.98
CDX86865 Canola plasma membrane 46.31 46.77
KRH74148 Soybean plasma membrane 48.9 46.76
Bra033189.1-P Field mustard mitochondrion, plasma membrane 47.31 46.75
CDY25243 Canola mitochondrion, plasma membrane 47.31 46.75
KRH49067 Soybean plasma membrane 37.72 46.1
Bra037910.1-P Field mustard mitochondrion, plasma membrane 47.11 46.0
CDX94264 Canola mitochondrion, plasma membrane 46.51 45.96
CDX86866 Canola mitochondrion, plasma membrane 46.91 45.81
KRH25841 Soybean plasma membrane 50.7 45.2
GSMUA_Achr1P23670_001 Banana plasma membrane, plastid, vacuole 41.52 45.12
KRH55676 Soybean mitochondrion, plasma membrane 51.3 44.77
CDX99535 Canola mitochondrion, plasma membrane 46.91 44.76
CDY05096 Canola plasma membrane 39.32 44.27
OQU82274 Sorghum plasma membrane 38.92 44.12
GSMUA_Achr1P23660_001 Banana plasma membrane 39.12 43.27
TraesCS2D01G428300.1 Wheat plasma membrane 37.52 42.44
CDX99538 Canola plasma membrane 45.11 42.4
TraesCS4B01G370800.1 Wheat plasma membrane 43.71 42.28
Os04t0607600-01 Rice plasma membrane 41.92 42.0
TraesCS4D01G361300.1 Wheat plasma membrane 42.71 41.47
TraesCS4B01G376000.1 Wheat plasma membrane 41.72 41.47
HORVU4Hr1G087960.1 Barley golgi, plasma membrane, plastid 41.72 40.27
TraesCS2D01G428400.1 Wheat vacuole 35.53 40.0
Zm00001d002378_P001 Maize plastid 42.12 39.89
EES02854 Sorghum plasma membrane 43.31 39.74
Zm00001d040627_P001 Maize plasma membrane 41.92 39.25
CDX90754 Canola plastid 45.71 39.15
Bra000707.1-P Field mustard plastid 45.31 38.8
Os01t0307500-01 Rice nucleus, peroxisome, plasma membrane 42.52 38.45
TraesCS2B01G451800.1 Wheat plastid 41.12 37.05
TraesCS2D01G428200.1 Wheat mitochondrion 41.12 36.59
TraesCS2B01G451300.1 Wheat mitochondrion 41.12 36.59
TraesCS2B01G451400.1 Wheat plastid 41.52 35.99
TraesCS2A01G430600.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 41.12 35.4
HORVU2Hr1G100450.3 Barley plastid 40.72 35.05
TraesCS2B01G451600.1 Wheat plasma membrane, plastid 38.92 33.05
HORVU2Hr1G100420.2 Barley plastid 28.54 26.83
Protein Annotations
EntrezGene:102584881MapMan:24.2.20InterPro:Cat_transptGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006812GO:GO:0008150GO:GO:0008324GO:GO:0016020GO:GO:0016021
GO:GO:0055085GO:GO:0098655UniProt:M1CXU4PFAM:PF02386EnsemblPlantsGene:PGSC0003DMG400029966PGSC:PGSC0003DMG400029966
EnsemblPlants:PGSC0003DMT400077052PANTHER:PTHR31064PANTHER:PTHR31064:SF20TMHMM:TMhelixUniParc:UPI000294E427RefSeq:XP_006359731.1
SEG:seg:::::
Description
Sodium transporter hkt1 [Source:PGSC_GENE;Acc:PGSC0003DMG400029966]
Coordinates
chr7:+:8188850..8194714
Molecular Weight (calculated)
57037.5 Da
IEP (calculated)
9.479
GRAVY (calculated)
0.322
Length
501 amino acids
Sequence
(BLAST)
001: MKPLSFSFFK IMSLRVKPFW IELGYFTTLS FLGFLALNYF SKPRTLPSFR PQNLDVFFTS VSSTTVSSMS TIEMEVFSNV QLVFMTILMF LGGEAFTSFL
101: RLKLIKKENK DESFSCKDYE LGNVINVDDK LEDVIITNPI EDHSHHDHHD EIIKIKSIRL LSNVVFGYIL VIILLGSSLV SLYIIIIPSA KQILNKKGLN
201: LHTFSLFTTV STFANCGFVP TNENMMIFKQ NSGLLLILIP QILLGNTLFA PCLRLVIMFL WKITKRHEFE YILKNSKRIG FSHIFPCYET ISIAITVVGL
301: IVFQFVVFCS LEWNSKGTSG LSTYEKIVGS LFEVVNTRHT GQSVFDLSTF TPAILVLFAS MMYLSSYTTF LPVYNYEEKS EKMKKRKGRS LMDYISLSQP
401: SCLVIFTILI CVVEKDKMKN DPLNFNVLNI LFEVISAYGT VGMSIGYSCA RQINPDGHCK DATYGFAGKW SNTGKFILII VMFFGRLKKY NQRGGKAWKV
501: L
Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.