Factsheet for HORVU2Hr1G100420.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G100450.3	Barley	plastid	81.99	75.09
TraesCS2D01G428200.1	Wheat	mitochondrion	66.42	62.88
TraesCS2A01G430600.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	67.17	61.51
TraesCS2B01G451400.1	Wheat	plastid	66.6	61.42
TraesCS2D01G428300.1	Wheat	plasma membrane	48.03	57.79
OQU82274	Sorghum	plasma membrane	41.84	50.45
Os04t0607600-01	Rice	plasma membrane	45.4	48.4
Zm00001d002378_P001	Maize	plastid	47.28	47.64
KRH49067	Soybean	plasma membrane	25.7	33.41
CDY05096	Canola	plasma membrane	26.08	31.24
VIT_11s0103g00140.t01	Wine grape	plastid	31.14	30.74
VIT_11s0103g00010.t01	Wine grape	plasma membrane, vacuole	21.39	30.73
VIT_11s0103g00150.t01	Wine grape	plasma membrane	31.33	30.31
AT4G10310.1	Thale cress	plasma membrane	28.33	29.84
Bra037912.1-P	Field mustard	plasma membrane	27.58	29.64
CDY25243	Canola	mitochondrion, plasma membrane	28.14	29.59
Bra033189.1-P	Field mustard	mitochondrion, plasma membrane	28.14	29.59
VIT_11s0103g00130.t01	Wine grape	plasma membrane	30.77	29.5
CDX94264	Canola	mitochondrion, plasma membrane	27.95	29.39
CDX86865	Canola	plasma membrane	27.2	29.23
CDX86866	Canola	mitochondrion, plasma membrane	27.95	29.04
Bra037910.1-P	Field mustard	mitochondrion, plasma membrane	27.58	28.66
PGSC0003DMT400077052	Potato	endoplasmic reticulum, vacuole	26.83	28.54
HORVU4Hr1G087960.1	Barley	golgi, plasma membrane, plastid	27.77	28.52
CDX99535	Canola	mitochondrion, plasma membrane	27.95	28.38
CDX99538	Canola	plasma membrane	28.33	28.33
KRH25841	Soybean	plasma membrane	29.27	27.76
KRH55676	Soybean	mitochondrion, plasma membrane	29.83	27.7
Solyc07g014680.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	19.89	27.11
KRH74148	Soybean	plasma membrane	26.64	27.1
HORVU6Hr1G031360.1	Barley	mitochondrion, plastid	25.89	25.94
CDX90754	Canola	plastid	28.14	25.64
HORVU7Hr1G096920.11	Barley	mitochondrion, plasma membrane	24.39	25.59
Bra000707.1-P	Field mustard	plastid	27.95	25.47
Solyc07g014690.2.1	Tomato	plasma membrane	26.45	25.41
HORVU0Hr1G022090.3	Barley	plasma membrane	24.77	24.35
VIT_11s0103g00050.t01	Wine grape	plasma membrane	10.13	24.32
VIT_11s0103g00090.t01	Wine grape	extracellular, plasma membrane	1.88	10.75

Protein Annotations

EnsemblPlants:HORVU2Hr1G100420.2	EnsemblPlantsGene:HORVU2Hr1G100420	GO:GO:0003674	GO:GO:0005215	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0055085	InterPro:Cat_transpt	PANTHER:PTHR31064	PANTHER:PTHR31064:SF7
PFAM:PF02386	SEG:seg	TMHMM:TMhelix	MapMan:24.2.20	:	:

Description

No Description!

Coordinates

chrchr2H:+:691276989..691312172

Molecular Weight (calculated)

58860.1 Da

IEP (calculated)

11.465

GRAVY (calculated)

0.033

Length

533 amino acids

Sequence
(BLAST)

001: MHIHPPSPNP QHVHTYIVTS NMAGAHRKVC ELLYHTRRRS TAALNNVVSL MRSLSGSYAQ HHVKERVARW RRALAGRLSP RLGSLLVHVA YFLAVSWLGY
101: LVLAQLRFRA GGEGTRRPGA IDLFFTAVSA ATVSSMSTVE MEAFSNGQLL VLTVLMFVGG EVFLSLLGLA SKWSRLRKQA VSKSRRVEIH HVAELEMPPV
201: AAAGEFDNPT SMTSTAEEEV SKPLDRFDDT RLRRDAVLSL FFVVLAILLT VHVLGAAAIV AYIFHASSSA RRTLRKKALN EWTFAVFTTV STFSSCGYMP
301: TNENMAVFKR DTGLQLLLVP QALVGNTLFP TLLAVCVRAA AAATRRPDLV EMTARNGREL TGYYHLLPAR RCAMLAATVA GLVAVQVAMV CGMEWGGALR
401: GMGPWEKVSN AVFVAVNSRH TGESTLDLST LTPAIIVFLV LMMYVPASIH DMVSIPRELH RGRPPHEGDP GAQAAQERAS VTTLLPRHLR RRHLRHREGK
501: PRGRPAQLQP AQRRRPSRQR LRKCGLLHGL QLQ

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.