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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 4
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G428200.1 Wheat mitochondrion 81.1 83.84
TraesCS2D01G428300.1 Wheat plasma membrane 63.57 83.52
TraesCS2B01G451400.1 Wheat plastid 81.96 82.53
HORVU2Hr1G100420.2 Barley plastid 75.09 81.99
TraesCS2A01G430600.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 81.79 81.79
OQU82274 Sorghum plasma membrane 56.36 74.21
Os04t0607600-01 Rice plasma membrane 59.28 69.0
Zm00001d002378_P001 Maize plastid 59.79 65.78
VIT_11s0103g00090.t01 Wine grape extracellular, plasma membrane 8.93 55.91
VIT_11s0103g00010.t01 Wine grape plasma membrane, vacuole 30.76 48.25
VIT_11s0103g00050.t01 Wine grape plasma membrane 17.35 45.5
VIT_11s0103g00140.t01 Wine grape plastid 40.21 43.33
VIT_11s0103g00150.t01 Wine grape plasma membrane 40.03 42.29
Solyc07g014680.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 28.18 41.94
VIT_11s0103g00130.t01 Wine grape plasma membrane 39.86 41.73
AT4G10310.1 Thale cress plasma membrane 36.08 41.5
HORVU4Hr1G087960.1 Barley golgi, plasma membrane, plastid 36.77 41.23
KRH74148 Soybean plasma membrane 37.11 41.22
Bra033189.1-P Field mustard mitochondrion, plasma membrane 35.74 41.03
CDY25243 Canola mitochondrion, plasma membrane 35.74 41.03
PGSC0003DMT400077052 Potato endoplasmic reticulum, vacuole 35.05 40.72
CDX94264 Canola mitochondrion, plasma membrane 35.4 40.63
Bra037912.1-P Field mustard plasma membrane 34.54 40.52
KRH25841 Soybean plasma membrane 39.0 40.39
CDX86865 Canola plasma membrane 34.19 40.12
KRH55676 Soybean mitochondrion, plasma membrane 39.52 40.07
CDX86866 Canola mitochondrion, plasma membrane 34.88 39.57
Bra037910.1-P Field mustard mitochondrion, plasma membrane 34.54 39.18
CDY05096 Canola plasma membrane 29.73 38.88
CDX99535 Canola mitochondrion, plasma membrane 34.54 38.29
HORVU6Hr1G031360.1 Barley mitochondrion, plastid 34.71 37.97
KRH49067 Soybean plasma membrane 26.12 37.07
Solyc07g014690.2.1 Tomato plasma membrane 35.22 36.94
CDX99538 Canola plasma membrane 33.68 36.77
CDX90754 Canola plastid 35.91 35.73
Bra000707.1-P Field mustard plastid 35.74 35.56
HORVU0Hr1G022090.3 Barley plasma membrane 32.3 34.69
HORVU7Hr1G096920.11 Barley mitochondrion, plasma membrane 29.73 34.06
Protein Annotations
EnsemblPlants:HORVU2Hr1G100450.3EnsemblPlantsGene:HORVU2Hr1G100450GO:GO:0003674GO:GO:0005215GO:GO:0006810GO:GO:0006812
GO:GO:0008150GO:GO:0008324GO:GO:0055085GO:GO:0098655InterPro:Cat_transptPANTHER:PTHR31064
PANTHER:PTHR31064:SF7PFAM:PF02386SEG:segTMHMM:TMhelixUniParc:UPI000295024DUniProt:M0XC46
MapMan:24.2.20:::::
Description
No Description!
Coordinates
chrchr2H:-:691362478..691366839
Molecular Weight (calculated)
63978.4 Da
IEP (calculated)
10.186
GRAVY (calculated)
0.244
Length
582 amino acids
Sequence
(BLAST)
001: MHIHPPSPNP QHVHTYIVTS NMAGAHRKVC ELLYHTRRRS TAALNNVVSL MRSLSGSYAQ HHVKERVARW RRALAGRLSP RLGSLLVHVA YFLAVSWLGY
101: LVLAQLRFRA GGEGTRRPGA IDLFFTAVSA ATVSSMSTVE MEAFSNGQLL VLTVLMFVGG EVFLSLLGLA SKWSRLRKQA VSKSRRVEIH HVAELEMPPV
201: AAAGEFDNPT SMTSTAEEEV SKPLDRFDDT RLRRDAVLSL FFVVLAILLT VHVLGAAAIV AYIFHASSSA RRTLRKKALN EWTFAVFTTV STFSSCGYMP
301: TNENMAVFKR DTGLQLLLVP QALVGNTLFP PLLAACVRAA AAATRRVELK ETAKEGEVLT GYYHLLPARR CAMLAATVAG LVAVQVAMLC GMEWGGALRG
401: MSAWEKVSNA VFLAVNSRHT GETTLDISTL APAILVLFVL MMYLPPYTTW FPFGESSGVK DHPTEETKGL RLLKGTLLSQ LSYLAIFVIA ICITEREKLK
501: EDPLNFNLLS IVVEVVSAYG NVGFSMGYSC SRQISPDRLC TDRWTGFAGR WSDSGKVILI LVMLFGRLKK FSMSAGKAWK LS
Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.