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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • endoplasmic reticulum 2
  • plasma membrane 4
  • extracellular 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033189.1-P Field mustard mitochondrion, plasma membrane 100.0 100.0
CDX94264 Canola mitochondrion, plasma membrane 95.07 95.07
CDX86865 Canola plasma membrane 69.82 71.37
CDX86866 Canola mitochondrion, plasma membrane 71.4 70.57
CDY05096 Canola plasma membrane 60.75 69.21
CDX99535 Canola mitochondrion, plasma membrane 70.22 67.81
CDX99538 Canola plasma membrane 65.48 62.29
CDX90754 Canola plastid 69.43 60.17
PGSC0003DMT400077052 Potato endoplasmic reticulum, vacuole 46.75 47.31
GSMUA_Achr1P23670_001 Banana plasma membrane, plastid, vacuole 41.62 45.77
Solyc07g014680.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 34.71 45.01
TraesCS4B01G370800.1 Wheat plasma membrane 45.76 44.79
VIT_11s0103g00050.t01 Wine grape plasma membrane 19.53 44.59
KRH74148 Soybean plasma membrane 45.96 44.47
TraesCS4B01G376000.1 Wheat plasma membrane 43.79 44.05
TraesCS4D01G361300.1 Wheat plasma membrane 44.38 43.6
OQU82274 Sorghum plasma membrane 37.28 42.76
KRH49067 Soybean plasma membrane 34.32 42.44
KRH25841 Soybean plasma membrane 46.94 42.35
Solyc07g014690.2.1 Tomato plasma membrane 45.96 41.98
TraesCS2D01G428300.1 Wheat plasma membrane 36.29 41.53
HORVU4Hr1G087960.1 Barley golgi, plasma membrane, plastid 42.41 41.43
KRH55676 Soybean mitochondrion, plasma membrane 46.55 41.12
GSMUA_Achr1P23660_001 Banana plasma membrane 36.69 41.06
Os04t0607600-01 Rice plasma membrane 40.04 40.6
TraesCS2D01G428400.1 Wheat vacuole 35.5 40.45
EES02854 Sorghum plasma membrane 42.21 39.19
Zm00001d002378_P001 Maize plastid 40.83 39.13
Zm00001d040627_P001 Maize plasma membrane 40.43 38.32
TraesCS2D01G428200.1 Wheat mitochondrion 42.21 38.01
Os01t0307500-01 Rice nucleus, peroxisome, plasma membrane 41.42 37.91
TraesCS2B01G451800.1 Wheat plastid 41.42 37.77
TraesCS2B01G451300.1 Wheat mitochondrion 41.62 37.48
TraesCS2A01G430600.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 42.41 36.94
TraesCS2B01G451400.1 Wheat plastid 41.81 36.68
HORVU2Hr1G100450.3 Barley plastid 41.03 35.74
TraesCS2B01G451600.1 Wheat plasma membrane, plastid 39.45 33.9
HORVU2Hr1G100420.2 Barley plastid 29.59 28.14
Protein Annotations
MapMan:24.2.20GO:A0A078GKW8UniProt:A0A078GKW8EnsemblPlants:CDY25243ProteinID:CDY25243ProteinID:CDY25243.1
InterPro:Cat_transptGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006812
GO:GO:0008150GO:GO:0008324GO:GO:0016020GO:GO:0016021GO:GO:0055085GO:GO:0098655
EnsemblPlantsGene:GSBRNA2T00029268001PFAM:PF02386PANTHER:PTHR31064PANTHER:PTHR31064:SF20TMHMM:TMhelixUniParc:UPI00025457A1
SEG:seg:::::
Description
BnaA02g22130DBnaA02g22130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKW8]
Coordinates
chrLK032172:+:19252..22431
Molecular Weight (calculated)
58026.3 Da
IEP (calculated)
8.802
GRAVY (calculated)
0.323
Length
507 amino acids
Sequence
(BLAST)
001: MERVGARILA KIRSQVFAKH LSPLCLYFIY FLTFSILGFL ALKISKPRIT SRPHDFDLFF TSVSALTISS MSTIDMEVFS NTQLIFLTIL MFLGGEVFTS
101: FLNLYFSHFT KFVYPHNKVR HLTDSFDLDR RMEEPRIDIE NVIDHQEGSI QMIERASKCL YSVVLGYHLI THLVGSLLVL VYVSFIKTAR DVLSSKDISP
201: LTFSVFMTVS TFANGGFVPT NENMIIFRKN SGLLWLLIPQ GLMGNTLFPC FLVLIIWGLY KITKRNEFGY ILKNHKKMGY YHLLSVRVCI LLGLTVLGFF
301: LFQFLLFCTF EWSSEPLEGM SWYEKLVGSL FQVVNSRHTG ETIVDISTLS PATLIFFITM MFLPPYTLFM PLTEENNNKD EEDDSGNGNK RKRSGFFVSQ
401: LSFLVICIFL VSIVEEEQLR RDPLNFNVLN ITLEVISAYG NVGFTTGYSC KRRLDASDGV CKDASYGFVG RWSPTGKIIL ILVMLYGRFK HFTSKSGRAW
501: ILYPSSF
Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.