Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 4
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040627_P001 | Maize | plasma membrane | 75.82 | 77.38 |
| TraesCS4D01G361300.1 | Wheat | plasma membrane | 63.0 | 66.67 |
| TraesCS4B01G376000.1 | Wheat | plasma membrane | 60.99 | 66.07 |
| HORVU4Hr1G087960.1 | Barley | golgi, plasma membrane, plastid | 62.27 | 65.51 |
| TraesCS4B01G370800.1 | Wheat | plasma membrane | 62.09 | 65.44 |
| Os01t0307500-01 | Rice | nucleus, peroxisome, plasma membrane | 64.29 | 63.36 |
| VIT_11s0103g00090.t01 | Wine grape | extracellular, plasma membrane | 9.34 | 54.84 |
| VIT_11s0103g00010.t01 | Wine grape | plasma membrane, vacuole | 34.8 | 51.21 |
| GSMUA_Achr1P23670_001 | Banana | plasma membrane, plastid, vacuole | 40.84 | 48.37 |
| GSMUA_Achr1P23660_001 | Banana | plasma membrane | 39.74 | 47.9 |
| OQU82274 | Sorghum | plasma membrane | 38.1 | 47.06 |
| VIT_11s0103g00130.t01 | Wine grape | plasma membrane | 47.44 | 46.58 |
| VIT_11s0103g00140.t01 | Wine grape | plastid | 45.6 | 46.11 |
| VIT_11s0103g00150.t01 | Wine grape | plasma membrane | 46.15 | 45.73 |
| Solyc07g014680.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 32.6 | 45.52 |
| KRH74148 | Soybean | plasma membrane | 43.22 | 45.04 |
| KRH55676 | Soybean | mitochondrion, plasma membrane | 47.25 | 44.95 |
| KRH25841 | Soybean | plasma membrane | 46.15 | 44.84 |
| AT4G10310.1 | Thale cress | plasma membrane | 41.39 | 44.66 |
| VIT_11s0103g00050.t01 | Wine grape | plasma membrane | 17.95 | 44.14 |
| Bra037912.1-P | Field mustard | plasma membrane | 39.74 | 43.75 |
| CDX86865 | Canola | plasma membrane | 39.74 | 43.75 |
| PGSC0003DMT400077052 | Potato | endoplasmic reticulum, vacuole | 39.74 | 43.31 |
| Bra033189.1-P | Field mustard | mitochondrion, plasma membrane | 39.19 | 42.21 |
| CDY25243 | Canola | mitochondrion, plasma membrane | 39.19 | 42.21 |
| KRH49067 | Soybean | plasma membrane | 31.5 | 41.95 |
| CDX94264 | Canola | mitochondrion, plasma membrane | 38.64 | 41.62 |
| CDX86866 | Canola | mitochondrion, plasma membrane | 39.01 | 41.52 |
| Bra037910.1-P | Field mustard | mitochondrion, plasma membrane | 38.83 | 41.33 |
| CDX99535 | Canola | mitochondrion, plasma membrane | 39.01 | 40.57 |
| CDY05096 | Canola | plasma membrane | 32.97 | 40.45 |
| CDX99538 | Canola | plasma membrane | 39.38 | 40.34 |
| Solyc07g014690.2.1 | Tomato | plasma membrane | 39.74 | 39.1 |
| EES04614 | Sorghum | mitochondrion | 37.73 | 38.72 |
| CDX90754 | Canola | plastid | 38.83 | 36.24 |
| Bra000707.1-P | Field mustard | plastid | 38.83 | 36.24 |
| EER90327 | Sorghum | mitochondrion | 34.43 | 34.5 |
Protein Annotations
| MapMan:24.2.20 | UniProt:C5XIQ5 | InterPro:Cat_transpt | EnsemblPlants:EES02854 | ProteinID:EES02854 | ProteinID:EES02854.2 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 |
| GO:GO:0008324 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | GO:GO:0098655 | PFAM:PF02386 |
| PANTHER:PTHR31064 | PANTHER:PTHR31064:SF13 | EnsemblPlantsGene:SORBI_3003G145800 | TMHMM:TMhelix | UniParc:UPI0003C72267 | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:14992220..14995112
Molecular Weight (calculated)
59622.4 Da
IEP (calculated)
8.967
GRAVY (calculated)
0.368
Length
546 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPFHIPSTS GPRKFYHLVL FHVHPFWIQL LYFLSISVLG FLMLRALPMK SISVPRPSAL DLVFTSVSAT TVSSMVAVEM ESFSNSQLLL MTLLMLLGGE
101: VFTSMLGLHF TFTKFIKKRE IPHSNNNSLH GNINGPAPAA PSSLEHGHRR RPMEMEAQAA AVQMELAGFN NDDQRDFASI ARLLMFIVLG YLSVVHLAGY
201: TLILIYLSVV GSAREVLVGK RISLSTFSVF TVVSTFANCG FVPTNEGMAS FKSFPGMLLL VMPHILLGNT LFPVFLRLSI TALERVTRRG DLRELLRDGG
301: PGGGGGGGGG PAAAAIGYDH LLPGGRTWCL ALTVAVFLAG QLLLYCAMEW GSDGLRGLTA FQKLVAALFM SVNSRHSGEM VVDLATVSSA IVVLYVLMMY
401: LPPYTTFLPI AMEDHQQQQN EAQSDDKSKS SSSISIWQKL LMSPLSCLTI FIVVICITER RQIADDPINF SVLNIVVEVI SAYGNVGFST GYSCSRQVTP
501: DGSCRDAWVG FSGKWSREGK LTLMAVMFYG RLKKFSMHGG QAWKLG
101: VFTSMLGLHF TFTKFIKKRE IPHSNNNSLH GNINGPAPAA PSSLEHGHRR RPMEMEAQAA AVQMELAGFN NDDQRDFASI ARLLMFIVLG YLSVVHLAGY
201: TLILIYLSVV GSAREVLVGK RISLSTFSVF TVVSTFANCG FVPTNEGMAS FKSFPGMLLL VMPHILLGNT LFPVFLRLSI TALERVTRRG DLRELLRDGG
301: PGGGGGGGGG PAAAAIGYDH LLPGGRTWCL ALTVAVFLAG QLLLYCAMEW GSDGLRGLTA FQKLVAALFM SVNSRHSGEM VVDLATVSSA IVVLYVLMMY
401: LPPYTTFLPI AMEDHQQQQN EAQSDDKSKS SSSISIWQKL LMSPLSCLTI FIVVICITER RQIADDPINF SVLNIVVEVI SAYGNVGFST GYSCSRQVTP
501: DGSCRDAWVG FSGKWSREGK LTLMAVMFYG RLKKFSMHGG QAWKLG
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.