CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 4
golgi 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014680_P001	Maize	plasma membrane, plastid	72.11	70.81
TraesCS7B01G318800.1	Wheat	plasma membrane	55.78	59.84
TraesCS7D01G411300.1	Wheat	plasma membrane	55.41	59.45
TraesCS7A01G418600.1	Wheat	plasma membrane	54.86	58.86
HORVU7Hr1G096920.11	Barley	mitochondrion, plasma membrane	53.21	57.09
Os06t0701600-01	Rice	plasma membrane	53.03	56.78
Os01t0532600-00	Rice	plastid	50.46	54.03
GSMUA_Achr6P30960_001	Banana	plasma membrane	40.18	43.98
GSMUA_Achr7P16030_001	Banana	extracellular, plasma membrane, vacuole	19.82	41.22
OQU82274	Sorghum	plasma membrane	29.91	36.88
EES02854	Sorghum	plasma membrane	34.5	34.43
EES04614	Sorghum	mitochondrion	31.74	32.52

Protein Annotations

MapMan:24.2.20	EntrezGene:8065571	UniProt:C5Z968	InterPro:Cat_transpt	EnsemblPlants:EER90327	ProteinID:EER90327
ProteinID:EER90327.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0015081	GO:GO:0016020
GO:GO:0016021	GO:GO:0035725	GO:GO:0055085	PFAM:PF02386	PANTHER:PTHR31064	PANTHER:PTHR31064:SF11
EnsemblPlantsGene:SORBI_3010G251700	TMHMM:TMhelix	UniParc:UPI0001A897B8	RefSeq:XP_002438960.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:59102008..59104437

Molecular Weight (calculated)

57916.6 Da

IEP (calculated)

9.245

GRAVY (calculated)

0.350

Length

545 amino acids

Sequence
(BLAST)

001: MPIRFHVLAS AARHAVSSSV LVCRLIAYHL TPLLLHLTYF LAVDLLGFLA LVLLKPSNPG YRPRYIDVFF MSTSAVTVTG LATVEMEDLS SAQLVVLTLL
101: MLLGSEMFVS LLGLVLESSR NRRQQQRDHQ DHDSRVMAAA AVRDEPDLEE ANGPAAAPSA DSSGDGGDRN RKESSRDVRS LALVVSAYMA AILVVGSVLV
201: FAYVATVPTA RDVLARKRLS AALFSVFATV SSFTNGGLLP TNESMAVFAP NRGLLLLLAA QILAGSTLLP VFLRLVVSAT RGLARALSLF TGRGGSVEEL
301: VPMDMEKSAA AAGFGHLLPS GSRAASLAAT VVAVATAAAA LLCCLNWNSA VFAGLTTGEK LTNAVFMAVN VRQAGENSVD CSLVAPAVLV LFLAMTCIPA
401: SATLLSVQDD GGEKTRSGAG EPERKDGAEK KRRRRLSLNS MLLSPLACNA AAVMLACITE RRSIAGDPLN FSTFNVIFEV ISAYGNVGLS TGYSCSRLPP
501: PPATTACHDK PYSFSGWWSD QGKLLLVLLM LYGRLKGFHG QRRRR

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.