Factsheet for GSMUA_Achr7P16030_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

nucleus 1
plastid 1
extracellular 3
plasma membrane 4
endoplasmic reticulum 2
vacuole 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P30960_001	Banana	plasma membrane	56.49	29.72
TraesCS7A01G418200.1	Wheat	plasma membrane	46.95	26.91
TraesCS7D01G411200.1	Wheat	mitochondrion, plasma membrane	48.09	23.73
HORVU0Hr1G022090.3	Barley	plasma membrane	48.85	23.62
Os06t0701700-01	Rice	plasma membrane	47.33	23.4
TraesCS7B01G318700.1	Wheat	plasma membrane	48.47	23.35
TraesCS7A01G418500.1	Wheat	plasma membrane	48.47	23.35
TraesCS7B01G318400.1	Wheat	plasma membrane	47.71	22.98
GSMUA_Achr1P23660_001	Banana	plasma membrane	37.4	21.63
TraesCS7B01G318800.1	Wheat	plasma membrane	40.08	20.67
Os06t0701600-01	Rice	plasma membrane	39.31	20.24
TraesCS7A01G418600.1	Wheat	plasma membrane	38.93	20.08
TraesCS7D01G411300.1	Wheat	plasma membrane	38.93	20.08
EER90327	Sorghum	mitochondrion	41.22	19.82
Zm00001d014680_P001	Maize	plasma membrane, plastid	41.6	19.64
Os01t0532600-00	Rice	plastid	37.79	19.45
HORVU7Hr1G096920.11	Barley	mitochondrion, plasma membrane	37.4	19.29
GSMUA_Achr1P23670_001	Banana	plasma membrane, plastid, vacuole	33.21	18.87

Protein Annotations

EnsemblPlants:GSMUA_Achr7P16030_001	EnsemblPlants:GSMUA_Achr7T16030_001	EnsemblPlantsGene:GSMUA_Achr7G16030_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008324	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	GO:GO:0098655	InterPro:Cat_transpt	PANTHER:PTHR31064	PANTHER:PTHR31064:SF9	PFAM:PF02386
SEG:seg	TMHMM:TMhelix	UniParc:UPI000294A34C	UniProt:M0THZ0	MapMan:35.1	:

Description

Putative Cation transporter HKT2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G16030_001]

Coordinates

chr7:-:12927815..12929189

Molecular Weight (calculated)

27955.2 Da

IEP (calculated)

6.349

GRAVY (calculated)

0.415

Length

262 amino acids

Sequence
(BLAST)

001: MLFMPTSALT VSGLAAVEME NLSSAQIVVL SLLMFHGGKV FVTLLGLLFG RGKQDEPGSS AGRVDSACIE LESVDPSQNT IDRIESGISP PAAGADESSV
101: RSLGYVVSGY VAIFHLIGTS LLLGARGILK TKGIDVFLFC LSATVSSFAN GGLIASNENM AIMNKDPVVL LLMIAQVLGG NTVFPLQEEV SQLSYIAIFI
201: IAICITERRK MTRDPHNFST LKLIFEVISG YRNVGLPTGH SCWRLLRLHP QAYPGSSSSM EG

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.