Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G411200.1 | Wheat | mitochondrion, plasma membrane | 90.81 | 93.03 |
| TraesCS7B01G318700.1 | Wheat | plasma membrane | 91.91 | 91.91 |
| HORVU0Hr1G022090.3 | Barley | plasma membrane | 88.24 | 88.56 |
| TraesCS7A01G418200.1 | Wheat | plasma membrane | 72.06 | 85.78 |
| Os06t0701700-01 | Rice | plasma membrane | 62.13 | 63.77 |
| GSMUA_Achr6P30960_001 | Banana | plasma membrane | 49.08 | 53.61 |
| TraesCS7A01G418600.1 | Wheat | plasma membrane | 47.24 | 50.59 |
| GSMUA_Achr7P16030_001 | Banana | extracellular, plasma membrane, vacuole | 23.35 | 48.47 |
| TraesCS2A01G430600.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 33.64 | 31.44 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G418500.1 | EnsemblPlantsGene:TraesCS7A01G418500 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0008324 | GO:GO:0055085 | InterPro:Cat_transpt | ncoils:Coil | PANTHER:PTHR31064 |
| PANTHER:PTHR31064:SF9 | PFAM:PF02386 | SEG:seg | TMHMM:TMhelix | MapMan:24.2.20 | : |
Description
No Description!
Coordinates
chr7A:+:610433709..610435734
Molecular Weight (calculated)
60146.4 Da
IEP (calculated)
9.029
GRAVY (calculated)
0.490
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MHLFLTLVHS TMDRVKRFYQ DFIHIKLHSF SRISRYVVDS IVFIYRFVAL HVHPFWIQLS YFLAIAILGS VLLISLKPSN PEFSPPYIDM LYLSTSALTV
101: SGLSTVKMED LSSSQIVVLT LLMLVGGEIF VSLLGLMLRV NHQDMQDLPS VKISSVPVEL EVLDLANSMA LCDESQLEDA SHAIPPKKCT ELKRSRSVKC
201: LGYVVFGYFA VIHVLGFVLV FLYITHVPTA SAPLNKKGIN IVLFSLSVTV ASCANAGLVP TNENMVIFSK NSGLLLLLSG QMLAGNTLFP LFLRLLVWFL
301: GKLTKVKELR LMTKNPEEVH FANLLPRLPT VFLSSTVIGI VAAGVTLFCS VDWNSSVFDG LGSYQKTVNA FFMVVNARHS GENSIDCSLM SPAIVVLFIG
401: MMYLPSSATF APPSGDTKTT NENTKGKGKR GSLVQNLAFS PLGCNIIFVI VACITERRRL RSDPLNFSTL NMIFEVISAY GNVGLSTGYS CSRLHQLHPE
501: IICQDMPYSF SGWWSDGGKF LLVLVMLYGR LKVFAVSTGK SWKV
101: SGLSTVKMED LSSSQIVVLT LLMLVGGEIF VSLLGLMLRV NHQDMQDLPS VKISSVPVEL EVLDLANSMA LCDESQLEDA SHAIPPKKCT ELKRSRSVKC
201: LGYVVFGYFA VIHVLGFVLV FLYITHVPTA SAPLNKKGIN IVLFSLSVTV ASCANAGLVP TNENMVIFSK NSGLLLLLSG QMLAGNTLFP LFLRLLVWFL
301: GKLTKVKELR LMTKNPEEVH FANLLPRLPT VFLSSTVIGI VAAGVTLFCS VDWNSSVFDG LGSYQKTVNA FFMVVNARHS GENSIDCSLM SPAIVVLFIG
401: MMYLPSSATF APPSGDTKTT NENTKGKGKR GSLVQNLAFS PLGCNIIFVI VACITERRRL RSDPLNFSTL NMIFEVISAY GNVGLSTGYS CSRLHQLHPE
501: IICQDMPYSF SGWWSDGGKF LLVLVMLYGR LKVFAVSTGK SWKV
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.