Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G318400.1 | Wheat | plasma membrane | 93.75 | 93.75 |
| TraesCS7A01G418500.1 | Wheat | plasma membrane | 91.91 | 91.91 |
| HORVU0Hr1G022090.3 | Barley | plasma membrane | 91.54 | 91.88 |
| TraesCS7D01G411200.1 | Wheat | mitochondrion, plasma membrane | 89.52 | 91.71 |
| Os06t0701700-01 | Rice | plasma membrane | 63.97 | 65.66 |
| GSMUA_Achr6P30960_001 | Banana | plasma membrane | 49.26 | 53.82 |
| TraesCS7B01G318800.1 | Wheat | plasma membrane | 47.79 | 51.18 |
| GSMUA_Achr7P16030_001 | Banana | extracellular, plasma membrane, vacuole | 23.35 | 48.47 |
| TraesCS4B01G370800.1 | Wheat | plasma membrane | 38.24 | 40.15 |
| TraesCS4B01G376000.1 | Wheat | plasma membrane | 36.58 | 39.48 |
| TraesCS6B01G182600.1 | Wheat | mitochondrion, plasma membrane | 33.46 | 34.21 |
| TraesCS2B01G451800.1 | Wheat | plastid | 34.93 | 34.17 |
| TraesCS2B01G451300.1 | Wheat | mitochondrion | 33.82 | 32.68 |
| TraesCS2B01G451400.1 | Wheat | plastid | 34.01 | 32.01 |
| TraesCS2B01G451600.1 | Wheat | plasma membrane, plastid | 33.27 | 30.68 |
| TraesCS2B01G451700.3 | Wheat | plasma membrane | 30.7 | 28.99 |
Protein Annotations
| MapMan:24.2.20 | InterPro:Cat_transpt | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008324 | GO:GO:0009987 | GO:GO:0015079 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | GO:GO:0071805 | InterPro:K/Na_transp_Trk/HKT | PFAM:PF02386 | PANTHER:PTHR31064 |
| PANTHER:PTHR31064:SF9 | TIGRFAMs:TIGR00934 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7B01G318700 | EnsemblPlants:TraesCS7B01G318700.1 | SEG:seg |
Description
No Description!
Coordinates
chr7B:+:568645776..568647799
Molecular Weight (calculated)
60230.5 Da
IEP (calculated)
9.070
GRAVY (calculated)
0.492
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MHLFLTLIHS TMGRVKRFYQ DFIHIKLHSF CRISRYVVDS IAFVYRFVAL HVHPFWIQLS YFLAIAILGS VLLMSLKPSN PDFSPPYIDM LFLSTSALTV
101: SGLSAITMED LSSSQIVVLT LLMLAGGEIF VSLLGLMLRV NHQDMPDLPS MKISSVPVEL QEIDLANSVA LCDESQLEEA AHAIPPKKCT ELKRSRPVKC
201: LGYVVFGYFA VIHVLGFLLV FLYITHVPTA SAPLNKKGIN IVLFSLSVTV ASCANAGLVP TNENMVIFSK NSGLLLLLSG QILAGNTLFP LFLRLLVWFL
301: GRLTKVKELR HMIKNPEEVH FANLLPRLPT AFLSSTVVGL VAAGVTMFCA VDWNSSVFDG LSSYQKTVNA FFMVVNARHS GENSIDCSLM SPVIIVLFIV
401: MMYLPSSATF ATPNGDTKTT NENTKGKAKR GSLVQNLAFS PLGCNIIFVI VACITERRRL RNDPLNFSTL NMIFEVISAY GNVGLSTGYS CSRLHQLHPE
501: IICQDKPYSF SGWWSDGGKF LLVLVMLYGR LKVFAVSTGK SWRV
101: SGLSAITMED LSSSQIVVLT LLMLAGGEIF VSLLGLMLRV NHQDMPDLPS MKISSVPVEL QEIDLANSVA LCDESQLEEA AHAIPPKKCT ELKRSRPVKC
201: LGYVVFGYFA VIHVLGFLLV FLYITHVPTA SAPLNKKGIN IVLFSLSVTV ASCANAGLVP TNENMVIFSK NSGLLLLLSG QILAGNTLFP LFLRLLVWFL
301: GRLTKVKELR HMIKNPEEVH FANLLPRLPT AFLSSTVVGL VAAGVTMFCA VDWNSSVFDG LSSYQKTVNA FFMVVNARHS GENSIDCSLM SPVIIVLFIV
401: MMYLPSSATF ATPNGDTKTT NENTKGKAKR GSLVQNLAFS PLGCNIIFVI VACITERRRL RNDPLNFSTL NMIFEVISAY GNVGLSTGYS CSRLHQLHPE
501: IICQDKPYSF SGWWSDGGKF LLVLVMLYGR LKVFAVSTGK SWRV
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.