Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G428500.1 | Wheat | plasma membrane | 65.28 | 82.28 |
| Os04t0607583-00 | Rice | plasma membrane | 29.51 | 58.42 |
| TraesCS6B01G182600.1 | Wheat | mitochondrion, plasma membrane | 38.72 | 41.92 |
| TraesCS4B01G376000.1 | Wheat | plasma membrane | 33.33 | 38.1 |
| TraesCS4B01G370800.1 | Wheat | plasma membrane | 32.81 | 36.49 |
| TraesCS7B01G318800.1 | Wheat | plasma membrane | 29.69 | 33.66 |
| TraesCS2B01G451800.1 | Wheat | plastid | 32.12 | 33.27 |
| TraesCS2B01G451300.1 | Wheat | mitochondrion | 31.25 | 31.97 |
| TraesCS2B01G451400.1 | Wheat | plastid | 31.94 | 31.83 |
| TraesCS7B01G318400.1 | Wheat | plasma membrane | 29.69 | 31.43 |
| TraesCS2B01G451600.1 | Wheat | plasma membrane, plastid | 31.94 | 31.19 |
| TraesCS7B01G318700.1 | Wheat | plasma membrane | 28.99 | 30.7 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G451700.3 | EnsemblPlantsGene:TraesCS2B01G451700 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0008324 | GO:GO:0055085 | InterPro:Cat_transpt | PANTHER:PTHR31064 | PANTHER:PTHR31064:SF8 |
| PFAM:PF02386 | SEG:seg | TMHMM:TMhelix | MapMan:24.2.20 | : | : |
Description
No Description!
Coordinates
chr2B:+:645307339..645309871
Molecular Weight (calculated)
64677.4 Da
IEP (calculated)
9.806
GRAVY (calculated)
0.176
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRFSSALVF LQNLPSHTAM KLPLFSLEAL RITKEMVKHF HEFVSTRLGS LSKCTADLFR RSYLFLVFKS NPLVVQLIYL MSISFAGFLA LKNLAPLNKP
101: SPRNLDLIFT SVSTVTVSSM ATIEMEDFSG QQLWVFIILM ILGGEVFTSM VGLHFKNARA NTEGALQTRL AFISRDIESS DDFNNSSQNY MEGIQPEETM
201: PHNQVQESKG MNHKSRNILA HVVAGYFIAA IVCSSVVITI FLWIDSDARH LLKSKHIKMW TFSIFTAVSS FANCGFTPLN DSMAIFKNNP TFLLLVTPQI
301: LVGNTLFAPL LRLSIWTLGK LSSREEYAYI LQHPKEIGYR HLQPHKNSVQ LVLTGVMLIL LQAMLICYFE WDSKSLEGMG WFQKLIGSLF QSANSRHAGE
401: TVIDISTLSP PIMVIFALVM YLPSGTSILA TCGDNRSLAD KKENPNGRAT WKKFAMTKRT CLVIITILAC ITERKSMTAD PLNFSIFSVI FEVMSAYGNV
501: GYSLGYSCDK LLRPDSACRD ASYGFVGRWS DKGRLIIILV MFLGRFKAYT LRGKKTLNVH PCRRTAPHQR PEVAGN
101: SPRNLDLIFT SVSTVTVSSM ATIEMEDFSG QQLWVFIILM ILGGEVFTSM VGLHFKNARA NTEGALQTRL AFISRDIESS DDFNNSSQNY MEGIQPEETM
201: PHNQVQESKG MNHKSRNILA HVVAGYFIAA IVCSSVVITI FLWIDSDARH LLKSKHIKMW TFSIFTAVSS FANCGFTPLN DSMAIFKNNP TFLLLVTPQI
301: LVGNTLFAPL LRLSIWTLGK LSSREEYAYI LQHPKEIGYR HLQPHKNSVQ LVLTGVMLIL LQAMLICYFE WDSKSLEGMG WFQKLIGSLF QSANSRHAGE
401: TVIDISTLSP PIMVIFALVM YLPSGTSILA TCGDNRSLAD KKENPNGRAT WKKFAMTKRT CLVIITILAC ITERKSMTAD PLNFSIFSVI FEVMSAYGNV
501: GYSLGYSCDK LLRPDSACRD ASYGFVGRWS DKGRLIIILV MFLGRFKAYT LRGKKTLNVH PCRRTAPHQR PEVAGN
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.