Factsheet for TraesCS2B01G451800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plasma membrane, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G428300.1	Wheat	plasma membrane	69.06	86.68
TraesCS2B01G451300.1	Wheat	mitochondrion	78.78	77.8
OQU82274	Sorghum	plasma membrane	57.55	72.4
TraesCS2B01G451400.1	Wheat	plastid	74.82	71.97
Os04t0607600-01	Rice	plasma membrane	59.71	66.4
Zm00001d002378_P001	Maize	plastid	63.13	66.35
TraesCS2B01G451600.1	Wheat	plasma membrane, plastid	66.73	62.88
VIT_11s0103g00090.t01	Wine grape	extracellular, plasma membrane	9.35	55.91
VIT_11s0103g00010.t01	Wine grape	plasma membrane, vacuole	32.19	48.25
VIT_11s0103g00050.t01	Wine grape	plasma membrane	18.7	46.85
VIT_11s0103g00140.t01	Wine grape	plastid	43.35	44.63
VIT_11s0103g00150.t01	Wine grape	plasma membrane	43.53	43.92
Solyc07g014680.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	30.4	43.22
AT4G10310.1	Thale cress	plasma membrane	38.49	42.29
KRH74148	Soybean	plasma membrane	39.21	41.6
VIT_11s0103g00130.t01	Wine grape	plasma membrane	41.55	41.55
TraesCS4B01G376000.1	Wheat	plasma membrane	37.59	41.47
CDY25243	Canola	mitochondrion, plasma membrane	37.77	41.42
Bra033189.1-P	Field mustard	mitochondrion, plasma membrane	37.77	41.42
TraesCS4B01G370800.1	Wheat	plasma membrane	38.31	41.12
PGSC0003DMT400077052	Potato	endoplasmic reticulum, vacuole	37.05	41.12
CDX94264	Canola	mitochondrion, plasma membrane	37.23	40.83
Bra037912.1-P	Field mustard	plasma membrane	36.15	40.52
CDX86865	Canola	plasma membrane	35.79	40.12
KRH55676	Soybean	mitochondrion, plasma membrane	41.19	39.9
KRH25841	Soybean	plasma membrane	40.11	39.68
Bra037910.1-P	Field mustard	mitochondrion, plasma membrane	36.51	39.57
CDX86866	Canola	mitochondrion, plasma membrane	36.51	39.57
Solyc07g014690.2.1	Tomato	plasma membrane	38.67	38.74
CDX99535	Canola	mitochondrion, plasma membrane	36.51	38.67
CDY05096	Canola	plasma membrane	30.76	38.43
TraesCS6B01G182600.1	Wheat	mitochondrion, plasma membrane	36.15	37.78
KRH49067	Soybean	plasma membrane	27.16	36.83
CDX99538	Canola	plasma membrane	34.53	36.02
Bra000707.1-P	Field mustard	plastid	37.05	35.21
CDX90754	Canola	plastid	37.05	35.21
TraesCS7B01G318400.1	Wheat	plasma membrane	34.35	35.11
TraesCS7B01G318700.1	Wheat	plasma membrane	34.17	34.93
TraesCS7B01G318800.1	Wheat	plasma membrane	30.04	32.87
TraesCS2B01G451700.3	Wheat	plasma membrane	33.27	32.12

Protein Annotations

EnsemblPlants:TraesCS2B01G451800.1	EnsemblPlantsGene:TraesCS2B01G451800	GO:GO:0003674	GO:GO:0005215	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0055085	InterPro:Cat_transpt	PANTHER:PTHR31064	PANTHER:PTHR31064:SF7
PFAM:PF02386	SEG:seg	TMHMM:TMhelix	MapMan:24.2.20	:	:

Description

No Description!

Coordinates

chr2B:+:645470305..645474293

Molecular Weight (calculated)

61125.0 Da

IEP (calculated)

10.108

GRAVY (calculated)

0.272

Length

556 amino acids

Sequence
(BLAST)

001: MAGAHHKVGE LLHHTPRSST AAVDKAMSSP SSSYAQHHVV KERVARWRRA LAGRFWPRVG SLLVQVAYFL AVSWLGYLLL AQLRFRGDGT RRPRGIDLFF
101: TAVSAATVSS MSTVEMEVFS NGQLLVLTVL MLVGGEVFLS LICLASKWFK LRKQAVHKSS RRVEIHHVAE LEMPPAAAAG IDNPTSTTAD DETSKSLEHV
201: PDTRLRRDAV LSLFFVVLAI LLAVHALGAI AIAAYILHAS PAARRTLRSK ALNVWTFSVF TTVSTFSSCG YMPTNENMIV FKRDTGLQLL LVPQALVGNT
301: LFPPLLAACV RAAAAATRCV ELRETVKQGG ELTGYYHLLP ARRCAMLAAT VVGFLTVQVA MLCGMEWSGA LRGMSPWEKV SNAVFLAVNS RHTGESTLDI
401: STVAPAILVL FVLMMYLPPY TTWFPFEGNS STKDHPKHEE ARGIKLIKST ILSQLSYLTI FVIAICVTER EKLKEDPLNF NLLSIVVEVV SAYGNVGFSM
501: GYSCSRQISP DQLCTDRWTG FVGRWSDSGK LILILVMLFG RLKKFSMKGG KAWKLS

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.