Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G418500.1 | Wheat | plasma membrane | 93.03 | 90.81 |
| TraesCS7B01G318700.1 | Wheat | plasma membrane | 91.71 | 89.52 |
| HORVU0Hr1G022090.3 | Barley | plasma membrane | 88.51 | 86.72 |
| Os06t0701700-01 | Rice | plasma membrane | 64.97 | 65.09 |
| GSMUA_Achr6P30960_001 | Banana | plasma membrane | 50.66 | 54.02 |
| TraesCS7D01G411300.1 | Wheat | plasma membrane | 48.59 | 50.79 |
| GSMUA_Achr7P16030_001 | Banana | extracellular, plasma membrane, vacuole | 23.73 | 48.09 |
| TraesCS4D01G361300.1 | Wheat | plasma membrane | 38.61 | 39.73 |
| TraesCS2D01G428300.1 | Wheat | plasma membrane | 31.83 | 38.15 |
| TraesCS2D01G428400.1 | Wheat | vacuole | 30.51 | 36.4 |
| TraesCS6D01G144500.1 | Wheat | plasma membrane | 35.22 | 35.15 |
| TraesCS2D01G428200.1 | Wheat | mitochondrion | 34.84 | 32.86 |
| TraesCS2D01G428500.1 | Wheat | plasma membrane | 27.12 | 31.51 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G411200.1 | EnsemblPlantsGene:TraesCS7D01G411200 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0008324 | GO:GO:0055085 | InterPro:Cat_transpt | PANTHER:PTHR31064 | PANTHER:PTHR31064:SF9 |
| PFAM:PF02386 | SEG:seg | TMHMM:TMhelix | MapMan:24.2.20 | : | : |
Description
No Description!
Coordinates
chr7D:+:530103178..530105155
Molecular Weight (calculated)
58754.7 Da
IEP (calculated)
8.911
GRAVY (calculated)
0.496
Length
531 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVKRFYQD FIHIKLHSFS RISRYVVDSM VFIYRFVALH VHPFWIQLSY FLAMAILGSV LLMSLKPSNP EFCPPYIDML YLSTSALTVS GLSTVKMEDL
101: SSSQIVVLTL LMLVGGEIFV SLLGLMLRVN HQDMQDLPSV KISSVPVELE VLDLANSMAL CDESQLEEAA HAIPPKKCTE LKRTESVKCF GHVIFGYFAV
201: IHVLGFLLVF LYITHVPTAS APLNKKGINI VLFSLSVTVS SFANAGLVPT NENMVIFSKN SGLLLLLSGQ MLAGNTLFPL FLRLLVWFLG KLTKVKELRL
301: MIKNPEEVHF ANLLPGLRTV FLSSTVVGLA AAGVTLFCAV DWNSSVFDGL SSYQKTVNAF FMVVNARHSG ENSIDCSLMS PAIIVLFIIM MYLPSSATFA
401: PPNGDTKTTD ASTKGKRGSL VQNLVFSPLG CNIIFVIVAC ITERRRLRND PLNFSTLNMI FEVISAYGNV GLSTGYSCSR LHQLHPEIIC QDKPYSFSGW
501: WSDGGKFLLV LVMLYGRLKA FAVSTGKSWK V
101: SSSQIVVLTL LMLVGGEIFV SLLGLMLRVN HQDMQDLPSV KISSVPVELE VLDLANSMAL CDESQLEEAA HAIPPKKCTE LKRTESVKCF GHVIFGYFAV
201: IHVLGFLLVF LYITHVPTAS APLNKKGINI VLFSLSVTVS SFANAGLVPT NENMVIFSKN SGLLLLLSGQ MLAGNTLFPL FLRLLVWFLG KLTKVKELRL
301: MIKNPEEVHF ANLLPGLRTV FLSSTVVGLA AAGVTLFCAV DWNSSVFDGL SSYQKTVNAF FMVVNARHSG ENSIDCSLMS PAIIVLFIIM MYLPSSATFA
401: PPNGDTKTTD ASTKGKRGSL VQNLVFSPLG CNIIFVIVAC ITERRRLRND PLNFSTLNMI FEVISAYGNV GLSTGYSCSR LHQLHPEIIC QDKPYSFSGW
501: WSDGGKFLLV LVMLYGRLKA FAVSTGKSWK V
001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS
Arabidopsis Description
HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.