Factsheet for TraesCS4D01G361300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G376000.1	Wheat	plasma membrane	88.18	90.28
TraesCS4B01G370800.1	Wheat	plasma membrane	83.14	82.82
HORVU4Hr1G087960.1	Barley	golgi, plasma membrane, plastid	81.2	80.73
Os01t0307500-01	Rice	nucleus, peroxisome, plasma membrane	68.99	64.26
EES02854	Sorghum	plasma membrane	66.67	63.0
Zm00001d040627_P001	Maize	plasma membrane	64.73	62.43
VIT_11s0103g00090.t01	Wine grape	extracellular, plasma membrane	9.69	53.76
GSMUA_Achr1P23660_001	Banana	plasma membrane	42.25	48.12
VIT_11s0103g00010.t01	Wine grape	plasma membrane, vacuole	34.5	47.98
GSMUA_Achr1P23670_001	Banana	plasma membrane, plastid, vacuole	42.64	47.72
VIT_11s0103g00140.t01	Wine grape	plastid	48.84	46.67
AT4G10310.1	Thale cress	plasma membrane	45.35	46.25
VIT_11s0103g00130.t01	Wine grape	plasma membrane	49.61	46.04
VIT_11s0103g00050.t01	Wine grape	plasma membrane	19.77	45.95
VIT_11s0103g00150.t01	Wine grape	plasma membrane	49.03	45.92
KRH74148	Soybean	plasma membrane	46.51	45.8
KRH25841	Soybean	plasma membrane	49.42	45.37
KRH55676	Soybean	mitochondrion, plasma membrane	49.61	44.6
CDY25243	Canola	mitochondrion, plasma membrane	43.6	44.38
Bra033189.1-P	Field mustard	mitochondrion, plasma membrane	43.6	44.38
KRH49067	Soybean	plasma membrane	35.08	44.15
Solyc07g014680.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	33.33	43.99
CDX94264	Canola	mitochondrion, plasma membrane	43.22	43.98
Bra037912.1-P	Field mustard	plasma membrane	42.25	43.95
CDX86865	Canola	plasma membrane	42.25	43.95
CDY05096	Canola	plasma membrane	37.21	43.15
PGSC0003DMT400077052	Potato	endoplasmic reticulum, vacuole	41.47	42.71
TraesCS2D01G428400.1	Wheat	vacuole	36.82	42.7
CDX86866	Canola	mitochondrion, plasma membrane	42.44	42.69
Bra037910.1-P	Field mustard	mitochondrion, plasma membrane	42.44	42.69
TraesCS2D01G428300.1	Wheat	plasma membrane	36.63	42.66
CDX99535	Canola	mitochondrion, plasma membrane	42.64	41.9
CDX99538	Canola	plasma membrane	41.67	40.34
Solyc07g014690.2.1	Tomato	plasma membrane	43.02	40.0
TraesCS6D01G144500.1	Wheat	plasma membrane	40.89	39.66
TraesCS7D01G411300.1	Wheat	plasma membrane	38.18	38.78
TraesCS7D01G411200.1	Wheat	mitochondrion, plasma membrane	39.73	38.61
CDX90754	Canola	plastid	42.83	37.78
Bra000707.1-P	Field mustard	plastid	42.64	37.61
TraesCS2D01G428200.1	Wheat	mitochondrion	40.89	37.48
TraesCS2D01G428500.1	Wheat	plasma membrane	32.17	36.32

Protein Annotations

EnsemblPlants:TraesCS4D01G361300.1	EnsemblPlantsGene:TraesCS4D01G361300	GO:GO:0003674	GO:GO:0005215	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0008324	GO:GO:0055085	InterPro:Cat_transpt	PANTHER:PTHR31064	PANTHER:PTHR31064:SF13
PFAM:PF02386	SEG:seg	TMHMM:TMhelix	MapMan:24.2.20	:	:

Description

No Description!

Coordinates

chr4D:+:507965585..507967671

Molecular Weight (calculated)

57298.4 Da

IEP (calculated)

8.907

GRAVY (calculated)

0.353

Length

516 amino acids

Sequence
(BLAST)

001: MGSLHVSSSA TQHSKLERAY QLLVFHVHPF WLQLLYFVSI SFFGLVILKA LPMKTSTVPR PMDLDLIFTS VSATTVSSMV AVEMESFSNP QLLLLTLLML
101: LGGEVFTSML GLHFTYVKSK KKEAQAPHDH DDGDKGKPAP SSSLELAVTT GMDDVDRVEQ GFKDQPRYDR AFLTRLLLFI VLGYHVVVHL AGYSLMLVYL
201: SVVSGARAVL TGKGISLHTF SVFTVVSTFA NCGFVPNNEG MIAFRSFPGL LLLVMPHVLL GNTLFPVFLR LAIWALRRVT RRPELGELRS IGYDHLLTSR
301: HTWFLAFTVA AFVLAQLSLF CAMEWGSNGL RGLTAVQKLV AGLFMSVNSR HTGEMVVDLS TVSSALVVLY VVMMYLPPYT TFLPVEDDSD QQVGADQRDQ
401: KRITSMWRKL LMSPLSCLAI FIAVVCITER RQISDDPLNF NVLNITVEVI SAYGNVGFST GYSCGRQVTP DGGCRDTWVG FSGKWSWQGK LALIAVMFYG
501: RLKKFSMHGG EAWRIV

Best Arabidopsis Sequence Match ( AT4G10310.1 )
(BLAST)

001: MDRVVAKIAK IRSQLTKLRS LFFLYFIYFL FFSFLGFLAL KITKPRTTSR PHDFDLFFTS VSAITVSSMS TVDMEVFSNT QLIFLTILMF LGGEIFTSFL
101: NLYVSYFTKF VFPHNKIRHI LGSYNSDSSI EDRCDVETVT DYREGLIKID ERASKCLYSV VLSYHLVTNL VGSVLLLVYV NFVKTARDVL SSKEISPLTF
201: SVFTTVSTFA NCGFVPTNEN MIIFRKNSGL IWLLIPQVLM GNTLFPCFLV LLIWGLYKIT KRDEYGYILK NHNKMGYSHL LSVRLCVLLG VTVLGFLIIQ
301: LLFFCAFEWT SESLEGMSSY EKLVGSLFQV VNSRHTGETI VDLSTLSPAI LVLFILMMYL PPYTLFMPLT EQKTIEKEGG DDDSENGKKV KKSGLIVSQL
401: SFLTICIFLI SITERQNLQR DPINFNVLNI TLEVISAYGN VGFTTGYSCE RRVDISDGGC KDASYGFAGR WSPMGKFVLI IVMFYGRFKQ FTAKSGRAWI
501: LYPSSS

Arabidopsis Description

HKT1Sodium transporter HKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.