Factsheet for Zm00001d028228_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92636	Sorghum	cytosol, peroxisome, vacuole	88.25	86.37
HORVU4Hr1G067510.5	Barley	cytosol, peroxisome, plasma membrane	81.01	80.72
TraesCS4B01G244400.1	Wheat	cytosol, plasma membrane, vacuole	80.11	80.11
TraesCS4A01G066800.1	Wheat	cytosol, plasma membrane, vacuole	79.93	79.93
Os03t0216700-01	Rice	plasma membrane, vacuole	82.28	79.68
TraesCS4D01G245000.1	Wheat	plasma membrane	79.57	79.57
GSMUA_Achr8P31410_001	Banana	cytosol, peroxisome, plasma membrane	66.73	74.85
Zm00001d035115_P004	Maize	plasma membrane	50.63	45.53
Zm00001d025649_P001	Maize	plasma membrane	13.2	38.83
Zm00001d042411_P001	Maize	plastid	17.36	37.07
Zm00001d005080_P002	Maize	plastid	37.25	36.79
Zm00001d007814_P001	Maize	mitochondrion	18.44	35.54
Zm00001d021446_P002	Maize	plastid	35.62	34.02
Zm00001d040665_P001	Maize	plastid	33.09	32.8
Zm00001d035381_P001	Maize	plasma membrane	28.93	23.43
Zm00001d015060_P001	Maize	plastid	20.8	21.1

Protein Annotations

EntrezGene:100383875	MapMan:24.2.4.1.3	MapMan:25.4.6.1	EMBL:BT068511	UniProt:C0PJP2	ncoils:Coil
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0006855	GO:GO:0006879	GO:GO:0006950	GO:GO:0007154	GO:GO:0008150	GO:GO:0009605
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0009991	GO:GO:0015137	GO:GO:0015238
GO:GO:0015297	GO:GO:0015746	GO:GO:0016020	GO:GO:0016021	GO:GO:0016036	GO:GO:0019725
GO:GO:0030001	GO:GO:0046873	GO:GO:0055072	GO:GO:0055085	GO:GO:0071281	GO:GO:0071369
GO:GO:0071732	InterPro:MATE_fam	ProteinID:ONL95119.1	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF5
TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI000195CEED	EnsemblPlantsGene:Zm00001d028228	EnsemblPlants:Zm00001d028228_P001	EnsemblPlants:Zm00001d028228_T001
SEG:seg	:	:	:	:	:

Description

multidrug and toxic compound extrusion3 multidrug and toxic compound extrusion3

Coordinates

chr1:-:27284568..27293763

Molecular Weight (calculated)

57871.5 Da

IEP (calculated)

8.816

GRAVY (calculated)

0.650

Length

553 amino acids

Sequence
(BLAST)

001: MEDNGAAAAA AAPATSMPAE KRVAVIQGDA PPEPAAGLLP CGPRKTGLHL FVMNIRSVFK LDGLGSEVLR IAVPASLALA ADPLASLVDT AFIGRLGSVE
101: IAAVGVSIAI FNQVSKVCIY PLVSVTTSFV AEEDAIISKA VRGNSSQEED VEKASHVGFD PETSNLHASG PAGMAECVNS CIPTECAADP SGRQGRCEKR
201: YVPSVTSALI VGSILGLLQA VFLVLSARFV LNIMGVKSGS PMQGPAVRYL TIRSLGAPAV LLSLAMQGVF RGFKDTKTPL YATVVGDAAN IILDPILMFV
301: CHMGVTGAAI AHVVSQYMIT LILLCRLVQR VHVIPPSIKS LKFGRFLGCG FLLLARVVAV TFCVTLAASL AARHGPTVMA GFQICCQLWL ATSLLADGLA
401: VAGQAVLASA FAKNDSKKVA AATSRVLQLS IVLGMGLTVV LGLAMRFGAG IFTSDVPVIQ VIHRGIPFVA GTQTINSLAF VFDGINFGAS DYRYSAYSMV
501: AVASVSIPCL LYLSAHNGFI GIWIALTIYM SLRTIASTWR MGAARGPWTF LRN

Best Arabidopsis Sequence Match ( AT1G51340.2 )
(BLAST)

001: MMSEDGYNTD FPRNPLYIFF SDFRSVLKFD ELGLEIARIA LPAALALTAD PIASLVDTAF IGQIGPVELA AVGVSIALFN QVSRIAIFPL VSITTSFVAE
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS

Arabidopsis Description

DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.