Factsheet for GSMUA_Achr8P31410_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G066800.1	Wheat	cytosol, plasma membrane, vacuole	75.05	66.91
TraesCS4B01G244400.1	Wheat	cytosol, plasma membrane, vacuole	75.05	66.91
Zm00001d028228_P001	Maize	cytosol, plasma membrane, vacuole	74.85	66.73
EER92636	Sorghum	cytosol, peroxisome, vacuole	76.47	66.73
HORVU4Hr1G067510.5	Barley	cytosol, peroxisome, plasma membrane	75.05	66.67
TraesCS4D01G245000.1	Wheat	plasma membrane	74.64	66.55
Os03t0216700-01	Rice	plasma membrane, vacuole	76.47	66.02
GSMUA_Achr3P29780_001	Banana	plasma membrane	62.88	59.85
GSMUA_Achr4P06960_001	Banana	plasma membrane	60.85	59.76
Os01t0919100-01	Rice	cytosol, peroxisome, plasma membrane	68.76	56.69
OQU88105	Sorghum	cytosol, peroxisome, plasma membrane	67.95	55.83
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	22.52	40.66
GSMUA_Achr11P...	Banana	plastid	41.99	39.96
GSMUA_AchrUn_...	Banana	plasma membrane	17.24	38.46
GSMUA_Achr1P16310_001	Banana	plasma membrane	19.68	22.88

Protein Annotations

MapMan:24.2.4.1.3	MapMan:25.4.6.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0006855	GO:GO:0006879	GO:GO:0006950	GO:GO:0007154
GO:GO:0008150	GO:GO:0009605	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0009991
GO:GO:0015137	GO:GO:0015238	GO:GO:0015297	GO:GO:0015746	GO:GO:0016020	GO:GO:0016021
GO:GO:0016036	GO:GO:0019725	GO:GO:0030001	GO:GO:0046873	GO:GO:0055072	GO:GO:0055085
GO:GO:0071281	GO:GO:0071369	GO:GO:0071732	EnsemblPlantsGene:GSMUA_Achr8G31410_001	EnsemblPlants:GSMUA_Achr8P31410_001	EnsemblPlants:GSMUA_Achr8T31410_001
UniProt:M0TV93	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF5	TIGRFAMs:TIGR00797
TMHMM:TMhelix	UniParc:UPI000294F3B3	SEG:seg	:	:	:

Description

MATE efflux protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G31410_001]

Coordinates

chr8:-:33081765..33085884

Molecular Weight (calculated)

52797.5 Da

IEP (calculated)

9.685

GRAVY (calculated)

0.701

Length

493 amino acids

Sequence
(BLAST)

001: MEAAPGESDK GRAGSADVSS MTSSGVERRE KPRKTGFYIF FLDIRRVFRL DELGQEILRI AVPAALALAA DPLASLVDTA FIGRLGSVEI AAVGVSIAIF
101: NQVSKICIYP LVSVTTSFVA EEDAIMSTCV EEVKGFGGNR RYIPSVSSAL IVGGVVGLLQ AVFLIFAAKF VLRIMGVNSE SPMHAPALRY LTLRSLGAPA
201: VLLSLAMQGV FRGFKDTKTP LYATVVGDVS NIILDPVLMF VFHMGVSGAA IAHVISQYLI TLILLCRLVL KVDIVPPSIK ALKFRRFLRC GFLLLARVIA
301: VTFCVTLAAS LAAHHGPTSM AAFQVCLQLW LATSLLADGL AVAGQAILAT SFAKGDHDKV VVATARVLQY SILLGIGLTV TLGVGVQFGS GIFTKDMNVQ
401: RIIHKGLPFV AGTQTINSLA FVFDGINFGA SDYTYSAYSM AMASISIPCL IYLSSTHGFI GIWIALTIYM SIRTFASAWR MGAARGPWTF LWK

Best Arabidopsis Sequence Match ( AT1G51340.2 )
(BLAST)

001: MMSEDGYNTD FPRNPLYIFF SDFRSVLKFD ELGLEIARIA LPAALALTAD PIASLVDTAF IGQIGPVELA AVGVSIALFN QVSRIAIFPL VSITTSFVAE
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS

Arabidopsis Description

DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.