Factsheet for GSMUA_Achr1P16310_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 2
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84246	Sorghum	plasma membrane	71.7	71.7
CDY65815	Canola	plasma membrane	68.16	65.53
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	71.23	59.33
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	70.28	59.01
Os02t0122200-00	Rice	plastid, vacuole	65.33	58.07
TraesCS6B01G090100.1	Wheat	plasma membrane	68.63	56.73
TraesCS6A01G066900.3	Wheat	plasma membrane, plastid, vacuole	70.28	55.81
Zm00001d015060_P001	Maize	plastid	71.7	55.78
TraesCSU01G117300.1	Wheat	plastid	69.81	55.43
CDX83192	Canola	plastid	68.16	53.92
CDX82020	Canola	plastid	69.34	52.97
Bra031182.1-P	Field mustard	plastid	68.87	52.9
KRH29368	Soybean	plastid	67.69	52.56
KRH29367	Soybean	plastid	67.92	52.55
VIT_03s0038g00430.t01	Wine grape	plastid	69.58	52.03
AT2G21340.1	Thale cress	plastid	68.4	51.88
PGSC0003DMT400008778	Potato	plastid	65.8	51.29
PGSC0003DMT400008058	Potato	plastid	65.8	50.09
Solyc01g110280.2.1	Tomato	plastid	65.33	49.73
KRH24389	Soybean	extracellular	13.92	49.58
Bra000583.1-P	Field mustard	plastid	59.91	49.32
PGSC0003DMT400008050	Potato	mitochondrion, plasma membrane, plastid, vacuole	54.72	48.54
CDY42600	Canola	mitochondrion	60.38	47.76
CDY41956	Canola	mitochondrion	60.14	47.57
Bra011880.1-P	Field mustard	mitochondrion	60.14	47.4
AT4G39030.1	Thale cress	mitochondrion	60.61	47.33
GSMUA_AchrUn_...	Banana	plasma membrane	10.38	19.91
GSMUA_Achr3P29780_001	Banana	plasma membrane	24.06	19.69
GSMUA_Achr8P31410_001	Banana	cytosol, peroxisome, plasma membrane	22.88	19.68
GSMUA_Achr4P06960_001	Banana	plasma membrane	23.11	19.52
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	11.56	17.95
GSMUA_Achr11P...	Banana	plastid	21.7	17.76

Protein Annotations

EnsemblPlants:GSMUA_Achr1P16310_001	EnsemblPlants:GSMUA_Achr1T16310_001	EnsemblPlantsGene:GSMUA_Achr1G16310_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:MATE_fam	PANTHER:PTHR42893	PANTHER:PTHR42893:SF9	PFAM:PF01554
TMHMM:TMhelix	UniParc:UPI000296AF00	UniProt:M0S0D9	MapMan:11.8.4.1	MapMan:24.2.4.1.2	:

Description

Enhanced disease susceptibility 5 [Source:GMGC_GENE;Acc:GSMUA_Achr1G16310_001]

Coordinates

chr1:+:12172239..12181766

Molecular Weight (calculated)

45842.5 Da

IEP (calculated)

8.732

GRAVY (calculated)

0.804

Length

424 amino acids

Sequence
(BLAST)

001: MSLIDTMVIG QGSSLELAAL GPGTVFCDYL CYVFMFLSIA TSNMVATSLA KKDKRLVQHQ ISMLLFVAFA CGLGMLLFTR LLGTQILSAF VGSENLHLVP
101: AANSYIQIRS FAWPAVLVGM VAQSASLGMK DSWGPLKALA VASAVNGFGV IFLCCVCGYG IAGAAWATML SQVVAAFMMM ETLRKSGFSA LSVSIPSLRD
201: FLQILGIAAP VFMTMTSKVA FYSLLTYSAT SMGTITIAAH QVMINVFFMC TVFGEPLSQT AQSFMPELMH GVNRSLEKAR MLQKSLVVIG AIGGLTIGAV
301: GTSIPWLFPY IFTTDNVVIG EMHKVLLPYF IALMVTPSTL SLEGTLLAGR DLRFFSLSMI ACFCVAGLLL SLVCSKGFGL PGCWWALVGF QWARFSLALQ
401: RLLSPRGMLF SEEYYQHQLV KLKT

Best Arabidopsis Sequence Match ( AT2G21340.1 )
(BLAST)

001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA

Arabidopsis Description

DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.