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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031182.1-P Field mustard plastid 97.84 98.37
CDY65815 Canola plasma membrane 72.25 90.93
AT2G21340.1 Thale cress plastid 86.49 85.87
CDX83192 Canola plastid 82.88 85.82
GSMUA_Achr1P16310_001 Banana plasma membrane 52.97 69.34
VIT_03s0038g00410.t01 Wine grape cytosol, peroxisome, plasma membrane 63.24 68.96
OQU84246 Sorghum plasma membrane 50.27 65.8
VIT_03s0038g00430.t01 Wine grape plastid 64.32 62.96
Solyc01g110280.2.1 Tomato plastid 60.9 60.68
PGSC0003DMT400008058 Potato plastid 60.9 60.68
HORVU6Hr1G012070.9 Barley peroxisome, plastid 54.77 60.2
PGSC0003DMT400008778 Potato plastid 58.74 59.93
PGSC0003DMT400008050 Potato mitochondrion, plasma membrane, plastid, vacuole 51.53 59.83
CDY41956 Canola mitochondrion 57.3 59.33
CDY42600 Canola mitochondrion 57.12 59.14
Os02t0122200-00 Rice plastid, vacuole 50.45 58.7
TraesCS6B01G090100.1 Wheat plasma membrane 53.15 57.5
TraesCS6A01G066900.3 Wheat plasma membrane, plastid, vacuole 54.77 56.93
TraesCSU01G117300.1 Wheat plastid 54.59 56.74
Zm00001d015060_P001 Maize plastid 54.59 55.6
KRH24389 Soybean extracellular 10.45 48.74
CDX74015 Canola plasma membrane 20.9 22.66
CDX74014 Canola plasma membrane 21.08 22.12
CDY07957 Canola plasma membrane 21.08 22.12
CDY07959 Canola plasma membrane 21.08 22.03
CDY22150 Canola cytosol, plasma membrane, vacuole 20.54 21.59
CDY28001 Canola plasma membrane 20.18 21.13
CDY35980 Canola plasma membrane 20.36 21.08
CDY66973 Canola plasma membrane 19.46 20.89
CDY01220 Canola plasma membrane 19.46 20.89
CDY65471 Canola plasma membrane 19.46 20.77
CDY29628 Canola plasma membrane 19.28 20.74
CDY03629 Canola plasma membrane 19.28 20.58
CDX74016 Canola extracellular, plasma membrane, vacuole 5.05 20.29
CDY07737 Canola plastid 19.28 20.07
CDY63154 Canola plastid 18.02 19.57
CDY27977 Canola endoplasmic reticulum, extracellular, plasma membrane 6.67 18.05
CDY27978 Canola plasma membrane 13.33 16.16
CDY12082 Canola plastid 18.74 13.23
CDX90273 Canola plastid 18.74 13.21
Protein Annotations
MapMan:11.8.4.1MapMan:24.2.4.1.2GO:A0A078CZ08EnsemblPlants:CDX82020ProteinID:CDX82020ProteinID:CDX82020.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00137000001InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR42893PANTHER:PTHR42893:SF9TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EEE154
SEG:seg:::::
Description
BnaC08g35810D
Coordinates
chrLK031826:+:1915388..1918556
Molecular Weight (calculated)
59785.7 Da
IEP (calculated)
7.600
GRAVY (calculated)
0.540
Length
555 amino acids
Sequence
(BLAST)
001: MQIQCKALTF TVSSISSNPK LPFRSSITLP PWKPTLPSFR SSKSLDLRRC IRRNCSSPNQ ELVVGGVNGN GSIPEEEVIE LGVENAISVE VEVEEEGGKV
101: DDIANQSIWG QMKEIVMFTG PAAGLWLCGP LMSLIDTAVI GQGSSLELAA LGPATVVCDY LCYTFMFLSV ATSNLVATSL ARQDKDEVQH QISILLFIGL
201: ACGLMMMVFT RLFGSWALTA FTGAKNAEIV PAANTYVQIR GLAWPAVLIG WVAQSASLGM KDSWGPLKAL AVASAINGVG DIVLCTFLGY GIAGAAWATM
301: VSQVVAAYMM MDALNKKGYS AFSLSVPSPS ELLMIFGLAA PVFITMMSKV LFYTLLVYFA TSMGTSVIAA HQVMLQTYTM CTVWGEPLSQ TAQSFMPELL
401: FGVNRNLPKA RMLLKSLVII GATLGIVVGT IGTAIPWLFP SIFTHDKAVT FQMHTVIIPY FLALFATPST HSLEGTLLAG RDLRYISLTM TGCFAVAGLV
501: VMLLSNGGFG LRGCWYALVG FQWARFSLAL IRLLSRDGVL YSEDTSRYAE KVKAA
Best Arabidopsis Sequence Match ( AT2G21340.1 )
(BLAST)
001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA
Arabidopsis Description
DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.