Factsheet for VIT_03s0038g00430.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
vacuole 1
mitochondrion 1
plasma membrane 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.55	71.91
CDY65815	Canola	plasma membrane	55.73	71.66
GSMUA_Achr1P16310_001	Banana	plasma membrane	52.03	69.58
KRH29367	Soybean	plastid	63.14	65.33
KRH29368	Soybean	plastid	62.61	65.02
OQU84246	Sorghum	plasma membrane	48.5	64.86
Bra031182.1-P	Field mustard	plastid	62.96	64.67
CDX82020	Canola	plastid	62.96	64.32
CDX83192	Canola	plastid	60.49	63.99
AT2G21340.1	Thale cress	plastid	62.61	63.51
PGSC0003DMT400008778	Potato	plastid	57.67	60.11
Bra000583.1-P	Field mustard	plastid	54.14	59.61
Solyc01g110280.2.1	Tomato	plastid	58.02	59.07
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	52.56	59.01
PGSC0003DMT400008058	Potato	plastid	57.85	58.89
CDY41956	Canola	mitochondrion	55.38	58.58
Bra011880.1-P	Field mustard	mitochondrion	55.56	58.55
CDY42600	Canola	mitochondrion	55.2	58.4
Os02t0122200-00	Rice	plastid, vacuole	48.68	57.86
AT4G39030.1	Thale cress	mitochondrion	55.38	57.83
PGSC0003DMT400008050	Potato	mitochondrion, plasma membrane, plastid, vacuole	47.97	56.9
TraesCS6B01G090100.1	Wheat	plasma membrane	51.32	56.73
TraesCSU01G117300.1	Wheat	plastid	52.38	55.62
TraesCS6A01G066900.3	Wheat	plasma membrane, plastid, vacuole	52.2	55.43
Zm00001d015060_P001	Maize	plastid	52.73	54.86
KRH24389	Soybean	extracellular	10.41	49.58
VIT_08s0007g08200.t01	Wine grape	plasma membrane	20.63	23.08
VIT_06s0004g02140.t01	Wine grape	cytosol, plasma membrane, vacuole	20.81	23.0
VIT_13s0064g00940.t01	Wine grape	plasma membrane	20.28	21.02
VIT_13s0064g00930.t01	Wine grape	plasma membrane	19.58	20.71
VIT_08s0058g00510.t01	Wine grape	plastid	18.69	19.0
VIT_13s0019g05200.t01	Wine grape	cytosol	2.82	18.6
VIT_03s0038g03200.t01	Wine grape	plastid	19.75	18.54

Protein Annotations

EntrezGene:100265746	wikigene:100265746	MapMan:11.8.4.1	MapMan:24.2.4.1.2	ProteinID:CCB60712	ProteinID:CCB60712.1
UniProt:F6I196	EMBL:FN596508	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EntrezGene:LOC100265746	wikigene:LOC100265746	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893
PANTHER:PTHR42893:SF9	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI00015C89AB	ArrayExpress:VIT_03s0038g00430	EnsemblPlantsGene:VIT_03s0038g00430
EnsemblPlants:VIT_03s0038g00430.t01	unigene:Vvi.20993	RefSeq:XP_002274813	RefSeq:XP_002274813.1	SEG:seg	:

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F6I196]

Coordinates

chr3:-:398696..406451

Molecular Weight (calculated)

61097.2 Da

IEP (calculated)

8.472

GRAVY (calculated)

0.454

Length

567 amino acids

Sequence
(BLAST)

001: MPFKALSHAS HFHLQNPDLR RFSPPSTSFS NSPNTRFRNS PAPSLLCISP AANDRRHRLT ALCKSSSQEV LGETQDVASE NGGNGALVSS FEEEDVGEGE
101: EEAVEVVVGS KRKEFAADQS ILNQMKKIVM FSGPATALWI CGPLMSLIDT AVIGQGSSLE LAALGPGTVL CDNMSYVFMF LSIATSNMVA TALARKDKKE
201: VQHQISILLF IGLACGVLML FFMKFLGAWA LTAFTGPKNA HLVPAANTYV QIRGLAWPAV LIGWVAQSAS LGMKDSWGPL KALAVASAVN VTGHVVLCTL
301: LGYGIAGAAW ATMVSQVIAA YMMIEALNKK GFKAYSISVP SPSELLQIFK LAAPVFVTMV SKVSFYSLII YFATSMGTHT VAAHQVMIQM YSMCVVWGEP
401: LSQTAQSFMP ELMYGVDRSL SKAQTLLKSL LIIGVILGLL LGIVGTSVPA LFPNIFTPDP SVMQQMHKVL IPFFFALAVT PCTHSLEGTL LAGRDLKFLS
501: LSMSGCFTLG AIILWLVSNS GYGLPGCWCA LVGFQWARFF LSLRRLLSPN GVLFSEERYE LGKLKAA

Best Arabidopsis Sequence Match ( AT2G21340.1 )
(BLAST)

001: MQIQCKTLTF TVSSIPCNPK LPFPSSLTLR SWNPSFPSFR SSAVSGPKSS LKLNRFLRNC ASTNQELVVD GETGNGSISE LQGDAANGSI SPVEVEAEVE
101: EVKVDDLATQ SIWGQMKEIV MFTGPAAGLW LCGPLMSLID TAVIGQGSSL ELAALGPATV ICDYLCYTFM FLSVATSNLV ATSLARQDKD EVQHQISILL
201: FIGLACGVTM MVLTRLFGSW ALTAFTGVKN ADIVPAANKY VQIRGLAWPA VLIGWVAQSA SLGMKDSWGP LKALAVASAI NGVGDVVLCT FLGYGIAGAA
301: WATMVSQVVA AYMMMDALNK KGYSAFSFCV PSPSELLTIF GLAAPVFITM MSKVLFYTLL VYFATSMGTN IIAAHQVMLQ IYTMSTVWGE PLSQTAQSFM
401: PELLFGINRN LPKARVLLKS LVIIGATLGI VVGTIGTAVP WLFPGIFTRD KVVTSEMHKV IIPYFLALSI TPSTHSLEGT LLAGRDLRYI SLSMTGCLAV
501: AGLLLMLLSN GGFGLRGCWY ALVGFQWARF SLSLFRLLSR DGVLYSEDTS RYAEKVKAA

Arabidopsis Description

DTX46Protein DETOXIFICATION 46, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W4G3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.