Factsheet for VIT_13s0064g00930.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_06s0080g00970.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G08040.1	VIT_06s0080g00970.t01	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0064g00940.t01	Wine grape	plasma membrane	80.6	78.98
KRH27482	Soybean	plasma membrane	43.1	72.41
VIT_06s0004g02140.t01	Wine grape	cytosol, plasma membrane, vacuole	65.67	68.62
VIT_08s0007g08200.t01	Wine grape	plasma membrane	64.18	67.85
Solyc01g087150.2.1	Tomato	plasma membrane	65.49	66.86
GSMUA_Achr4P06960_001	Banana	plasma membrane	61.75	65.94
PGSC0003DMT400017707	Potato	cytosol, plasma membrane, vacuole	65.86	65.74
AT3G08040.1	Thale cress	cytosol, plasma membrane, vacuole	64.18	65.4
PGSC0003DMT400017700	Potato	plasma membrane	65.49	65.36
CDX74016	Canola	extracellular, plasma membrane, vacuole	16.79	65.22
Bra001282.1-P	Field mustard	plasma membrane	61.19	64.06
CDX74015	Canola	plasma membrane	61.19	64.06
GSMUA_Achr3P29780_001	Banana	plasma membrane	61.75	63.9
CDY07957	Canola	plasma membrane	63.06	63.89
CDY07959	Canola	plasma membrane	63.25	63.84
CDY28001	Canola	plasma membrane	63.06	63.77
CDX74014	Canola	plasma membrane	62.69	63.52
CDY35980	Canola	plasma membrane	63.43	63.43
Bra001283.1-P	Field mustard	plasma membrane	62.5	63.33
Bra029694.1-P	Field mustard	plasma membrane	63.25	63.25
KRH13953	Soybean	plasma membrane	64.74	62.75
CDY22150	Canola	cytosol, plasma membrane, vacuole	61.38	62.31
Bra040047.1-P	Field mustard	cytosol, plasma membrane, vacuole	61.38	62.31
KRH37984	Soybean	cytosol, plasma membrane, vacuole	64.18	61.87
TraesCS1D01G304800.1	Wheat	plasma membrane	57.28	61.77
TraesCS1A01G305200.1	Wheat	plasma membrane	57.28	61.77
TraesCS1B01G315900.1	Wheat	plasma membrane	57.09	61.57
CDY27977	Canola	endoplasmic reticulum, extracellular, plasma membrane	23.51	61.46
KRH27481	Soybean	plasma membrane	59.33	60.8
VIT_13s0019g05200.t01	Wine grape	cytosol	9.7	60.47
EES14441	Sorghum	plasma membrane	58.96	60.19
HORVU1Hr1G068960.15	Barley	plasma membrane	57.46	59.81
KRH20827	Soybean	cytosol, plasma membrane, vacuole	46.64	58.41
Zm00001d035115_P004	Maize	plasma membrane	56.16	48.94
Zm00001d025649_P001	Maize	plasma membrane	14.93	42.55
CDY27978	Canola	plasma membrane	34.7	40.61
Zm00001d042411_P001	Maize	plastid	19.4	40.15
VIT_08s0058g00510.t01	Wine grape	plastid	41.04	39.43
Zm00001d007814_P001	Maize	mitochondrion	20.34	37.98
VIT_03s0038g03200.t01	Wine grape	plastid	36.19	32.12
VIT_03s0038g00410.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.03	20.04
VIT_03s0038g00430.t01	Wine grape	plastid	20.71	19.58

Protein Annotations

EntrezGene:100244835	wikigene:100244835	MapMan:24.2.4.1.3	MapMan:25.4.6.1	ProteinID:CBI24885	ProteinID:CBI24885.3
ncoils:Coil	UniProt:D7T304	EMBL:FN595509	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EntrezGene:LOC100244835	wikigene:LOC100244835	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR42893	PANTHER:PTHR42893:SF7	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0001984AA2	ArrayExpress:VIT_13s0064g00930
EnsemblPlantsGene:VIT_13s0064g00930	EnsemblPlants:VIT_13s0064g00930.t01	RefSeq:XP_002275346	RefSeq:XP_002275346.1	SEG:seg	:

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:D7T304]

Coordinates

chr13:+:22791693..22797039

Molecular Weight (calculated)

57593.7 Da

IEP (calculated)

9.034

GRAVY (calculated)

0.626

Length

536 amino acids

Sequence
(BLAST)

001: MVDEGVFQPP ERKWKIPLLV FFKDASLVFK MDELGSEILC IAFPAALALA ADPIASLIDT AFIGHLGPVA LAAVGVSIAI FNQASRIAVF PLVSITTSLV
101: AEEDTIERIS NEVPKGENSE KVSDKNCETK ELKDADAMLE ILEEGSTKDS EMKASMPEDA PCVSTGGRNK AKSKREKRHI PSASTALVIG GLLGLIQTLF
201: LIFAAKPLLS FMGVKSGSPM LPPALKYLTL RSLGAPAVLL SLAMQGVFRG FKDTKTPLYA TVAGDLTNII LDPIFIFVCR LGISGAAIAH VISQYLISLI
301: LLLKLMTRVN LLPPRLKDLQ FHRFLKNGFL LLWRVIAVTF CVTLAASLAA RLGSIPMAAF QICLQVWLTS SLLADGLAVA GQAILACAFA EKDYGKATAA
401: ATRVLQMTFV LGLGLALLVG VGLKFGAGVF TRDPNVLQLI SISIPFIAAT QPINCLAFVF DGVNFGASDF AYTAYSMILV SILSIASLFY LSKTNGFVGI
501: WVALTIYMVL RILAGIWRMG TGTGPWHFLR GQFRLP

Best Arabidopsis Sequence Match ( AT3G08040.1 )
(BLAST)

001: MTETGDDLAT VKKPIPFLVI FKDLRHVFSR DTTGREILGI AFPAALALAA DPIASLIDTA FVGRLGAVQL AAVGVSIAIF NQASRITIFP LVSLTTSFVA
101: EEDTMEKMKE EANKANLVHA ETILVQDSLE KGISSPTSND TNQPQQPPAP DTKSNSGNKS NKKEKRTIRT ASTAMILGLI LGLVQAIFLI FSSKLLLGVM
201: GVKPNSPMLS PAHKYLSIRA LGAPALLLSL AMQGIFRGFK DTKTPLFATV VADVINIVLD PIFIFVLRLG IIGAAIAHVI SQYFMTLILF VFLAKKVNLI
301: PPNFGDLQFG RFLKNGLLLL ARTIAVTFCQ TLAAAMAARL GTTPMAAFQI CLQVWLTSSL LNDGLAVAGQ AILACSFAEK DYNKVTAVAS RVLQMGFVLG
401: LGLSVFVGLG LYFGAGVFSK DPAVIHLMAI GIPFIAATQP INSLAFVLDG VNFGASDFAY TAYSMVGVAA ISIAAVIYMA KTNGFIGIWI ALTIYMALRA
501: ITGIARMATG TGPWRFLRGR SSSSSS

Arabidopsis Description

DTX43Protein DETOXIFICATION 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFB0]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.