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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os10t0206800-01 Rice plasma membrane 82.29 80.45
TraesCS1A01G305200.1 Wheat plasma membrane 74.48 78.67
TraesCS1D01G304800.1 Wheat plasma membrane 74.48 78.67
TraesCS1B01G315900.1 Wheat plasma membrane 74.1 78.27
Zm00001d035115_P004 Maize plasma membrane 90.48 77.24
HORVU1Hr1G068960.15 Barley plasma membrane 74.1 75.53
GSMUA_Achr3P29780_001 Banana plasma membrane 67.81 68.73
GSMUA_Achr4P06960_001 Banana plasma membrane 65.52 68.53
KRH71966 Soybean extracellular, golgi 26.86 67.79
VIT_08s0007g08200.t01 Wine grape plasma membrane 63.62 65.88
VIT_06s0004g02140.t01 Wine grape cytosol, plasma membrane, vacuole 63.62 65.11
AT1G51340.2 Thale cress plasma membrane 63.05 64.27
PGSC0003DMT400018991 Potato cytosol, plasma membrane, vacuole 62.1 63.67
CDY01220 Canola plasma membrane 62.67 63.64
CDY66973 Canola plasma membrane 62.67 63.64
Bra030446.1-P Field mustard plasma membrane 62.67 63.64
CDY29628 Canola plasma membrane 62.48 63.57
Solyc11g065820.1.1 Tomato cytosol, plasma membrane, vacuole 61.52 63.33
CDY03629 Canola plasma membrane 62.67 63.27
CDY65471 Canola plasma membrane 62.67 63.27
Bra014272.1-P Field mustard plasma membrane 62.48 63.2
PGSC0003DMT400027815 Potato cytosol, plasma membrane, vacuole 62.1 62.45
KRH29719 Soybean extracellular 14.86 62.4
KRH25702 Soybean cytosol, peroxisome, plasma membrane, plastid 24.57 62.02
KRH27482 Soybean plasma membrane 37.33 61.44
Solyc01g008420.2.1 Tomato plasma membrane 62.29 61.01
VIT_13s0064g00940.t01 Wine grape plasma membrane 61.9 59.41
KRH10205 Soybean plasma membrane 62.67 59.39
KRH23130 Soybean plasma membrane 62.48 59.1
VIT_13s0064g00930.t01 Wine grape plasma membrane 60.19 58.96
KRH33105 Soybean plasma membrane 56.19 58.88
Zm00001d025649_P001 Maize plasma membrane 20.38 56.91
Solyc01g087150.2.1 Tomato plasma membrane 56.19 56.19
PGSC0003DMT400017707 Potato cytosol, plasma membrane, vacuole 57.33 56.05
CDX74014 Canola plasma membrane 55.81 55.39
Bra001282.1-P Field mustard plasma membrane 53.9 55.27
CDX74015 Canola plasma membrane 53.9 55.27
Bra001283.1-P Field mustard plasma membrane 55.62 55.2
CDY07957 Canola plasma membrane 55.43 55.01
CDY07959 Canola plasma membrane 55.62 54.99
PGSC0003DMT400017700 Potato plasma membrane 56.0 54.75
AT3G08040.1 Thale cress cytosol, plasma membrane, vacuole 54.48 54.37
CDX74016 Canola extracellular, plasma membrane, vacuole 14.29 54.35
CDY28001 Canola plasma membrane 54.48 53.96
Bra040047.1-P Field mustard cytosol, plasma membrane, vacuole 54.1 53.79
CDY22150 Canola cytosol, plasma membrane, vacuole 54.1 53.79
KRH71965 Soybean plasma membrane 29.71 53.61
Bra029694.1-P Field mustard plasma membrane 54.48 53.36
CDY35980 Canola plasma membrane 54.48 53.36
EER92636 Sorghum cytosol, peroxisome, vacuole 57.14 53.1
KRH27481 Soybean plasma membrane 52.19 52.39
Zm00001d042411_P001 Maize plastid 25.71 52.12
KRH13953 Soybean plasma membrane 54.86 52.08
CDY27977 Canola endoplasmic reticulum, extracellular, plasma membrane 20.19 51.71
KRH37984 Soybean cytosol, plasma membrane, vacuole 54.48 51.44
Zm00001d007814_P001 Maize mitochondrion 27.43 50.17
KRH20827 Soybean cytosol, plasma membrane, vacuole 39.62 48.6
VIT_13s0019g05200.t01 Wine grape cytosol 7.81 47.67
OQU88105 Sorghum cytosol, peroxisome, plasma membrane 54.1 47.33
KRG96963 Soybean plasma membrane 23.24 44.69
KXG27560 Sorghum plastid 43.05 41.7
KXG22777 Sorghum plastid 40.76 38.7
KXG32398 Sorghum plastid 36.76 35.54
CDY27978 Canola plasma membrane 29.71 34.06
KXG36122 Sorghum mitochondrion, plasma membrane 37.33 33.62
OQU84246 Sorghum plasma membrane 17.9 22.17
Protein Annotations
MapMan:24.2.4.1.1MapMan:24.2.4.1.3MapMan:25.4.6.1EntrezGene:8074023UniProt:C5YME9EnsemblPlants:EES14441
ProteinID:EES14441ProteinID:EES14441.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0010044GO:GO:0015137GO:GO:0015238GO:GO:0015297
GO:GO:0015746GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR42893PANTHER:PTHR42893:SF2EnsemblPlantsGene:SORBI_3007G020600unigene:Sbi.20939TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0001A879EFRefSeq:XP_002444946.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr7:-:1951149..1956615
Molecular Weight (calculated)
56552.5 Da
IEP (calculated)
6.730
GRAVY (calculated)
0.603
Length
525 amino acids
Sequence
(BLAST)
001: MMRGESESPL LLHRSADAME RGGEHHHHPL SVFLRDARLA FRWDELGQEI MKIAVPGALA LMADPVASLV DTAFIGHIGP VELGAVGVSI AVFNQVSRIA
101: VFPLVSVTTS FVAEEDAMSN CRDNDKINQE NECSVSVSEM EELISPEGAS ATTSISSFET DSCEVSVEQK RKNIPSVSTA LLLGGVLGLL ETVLLVFSAK
201: PILGYMGVTP DSAMMKPALQ YLVLRSLGAP AVLLSLATQG VFRGFKDTKT PLYATVAGDA INIVLDPIFI FVFQYGVSGA AIAHVISQYF IASILLWRLR
301: LHVDLLPPSF KHLQFGRFLK NGFLLLARVI AATFCVTLSA SMAARQGSTP MAAFQICLQT WLACSLLADG LAFAGQAILA SAFARKDYPK ATATASRILQ
401: LALVLGLILS ILLGIGLRIG SRLFTSDQGV LHHIYIGIPF VCLTQPINAL AFVFDGINYG ASDFGYAAYS MVLVAIVSII CILTLESYSG FIGIWIALVI
501: YMSLRMFAGF WRIGTAQGPW AYLRG
Best Arabidopsis Sequence Match ( AT1G51340.2 )
(BLAST)
001: MMSEDGYNTD FPRNPLYIFF SDFRSVLKFD ELGLEIARIA LPAALALTAD PIASLVDTAF IGQIGPVELA AVGVSIALFN QVSRIAIFPL VSITTSFVAE
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS
Arabidopsis Description
DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.