Factsheet for Bra030446.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66973	Canola	plasma membrane	100.0	100.0
CDY01220	Canola	plasma membrane	99.42	99.42
CDY29628	Canola	plasma membrane	96.33	96.51
Bra014272.1-P	Field mustard	plasma membrane	94.0	93.64
AT1G51340.2	Thale cress	plasma membrane	89.56	89.9
Os01t0162101-00	Rice	endoplasmic reticulum, extracellular	5.61	76.32
Solyc11g065820.1.1	Tomato	cytosol, plasma membrane, vacuole	70.02	70.98
PGSC0003DMT400018991	Potato	cytosol, plasma membrane, vacuole	70.21	70.9
VIT_06s0004g02140.t01	Wine grape	cytosol, plasma membrane, vacuole	69.83	70.37
PGSC0003DMT400027815	Potato	cytosol, plasma membrane, vacuole	67.12	66.48
KRH29719	Soybean	extracellular	15.86	65.6
KRH10205	Soybean	plasma membrane	69.83	65.16
GSMUA_Achr3P29780_001	Banana	plasma membrane	65.18	65.06
GSMUA_Achr4P06960_001	Banana	plasma membrane	63.06	64.94
Solyc01g008420.2.1	Tomato	plasma membrane	67.31	64.93
KRH23130	Soybean	plasma membrane	69.44	64.68
KRH25702	Soybean	cytosol, peroxisome, plasma membrane, plastid	25.34	62.98
EES14441	Sorghum	plasma membrane	63.64	62.67
TraesCS1A01G305200.1	Wheat	plasma membrane	60.15	62.58
TraesCS1D01G304800.1	Wheat	plasma membrane	59.96	62.37
TraesCS1B01G315900.1	Wheat	plasma membrane	59.57	61.97
HORVU1Hr1G068960.15	Barley	plasma membrane	59.57	59.81
VIT_13s0019g05200.t01	Wine grape	cytosol	9.67	58.14
Bra001282.1-P	Field mustard	plasma membrane	54.35	54.88
Bra001283.1-P	Field mustard	plasma membrane	55.9	54.63
Bra040047.1-P	Field mustard	cytosol, plasma membrane, vacuole	55.32	54.17
Bra029694.1-P	Field mustard	plasma membrane	54.55	52.61
Zm00001d035115_P004	Maize	plasma membrane	59.38	49.92
KRG96963	Soybean	plasma membrane	23.79	45.05
Zm00001d025649_P001	Maize	plasma membrane	15.47	42.55
Bra000055.1-P	Field mustard	plastid	40.04	40.59
Zm00001d042411_P001	Maize	plastid	20.12	40.15
Zm00001d007814_P001	Maize	mitochondrion	21.86	39.37
Bra010745.1-P	Field mustard	plastid	34.24	32.96
Bra031182.1-P	Field mustard	plastid	20.89	19.57
Bra000583.1-P	Field mustard	plastid	18.76	18.84
Bra011880.1-P	Field mustard	mitochondrion	18.38	17.66

Protein Annotations

MapMan:24.2.4.1.1	MapMan:24.2.4.1.3	MapMan:25.4.6.1	EnsemblPlantsGene:Bra030446	EnsemblPlants:Bra030446.1	EnsemblPlants:Bra030446.1-P
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150
GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4ENS6
InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF2	TIGRFAMs:TIGR00797	TMHMM:TMhelix
UniParc:UPI0002547ACF	SEG:seg	:	:	:	:

Description

AT1G51340 (E=1e-230) | MATE efflux family protein

Coordinates

chrA05:-:11343416..11345942

Molecular Weight (calculated)

55464.2 Da

IEP (calculated)

7.693

GRAVY (calculated)

0.623

Length

517 amino acids

Sequence
(BLAST)

001: MMSEDGYTKE IPFDFPRNPL CIFLSDFRSV FKFDELGLEI ARIALPAALA LTADPIASLV DTAFIGQIGP VELAAVGVSI ALFNQVSRIA IFPLVSITTS
101: FVAEEDACSS EENTNQDYKE CIETGINNTK EETQELIPGN ISTPDESKNS CSIFSVSESP VKKRNIPSAS SALIIGAILG LLQAVFLISS AKPLLSFMGV
201: KHDSPMLGPA QRYLSLRSLG APAVLLSLAT QGVFRGFKDT TTPLYATVIG DVTNIILDPI FIFVFRLGVT GAATAHVISQ YLMCGILLWK LMGQVDIFKM
301: STKHLQFCRF MKNGFLLLMR VVAVTFCVTL SASLAAREGP TSMAAFQVCL QVWLATSLLA DGFAVAGQAI LASAFAKKDY KRAAATASRV LQLGLVLGFL
401: LAVILGTGLH FGARLFTKDD KVLHLISIGL PFVAGTQPIN ALAFVFDGVN FGASDFGYAA ASLVMVAIVS VLCLVLLSAT HGFIGLWFGL TIYMSLRAAV
501: GFWRIGTATG PWSFLRR

Best Arabidopsis Sequence Match ( AT1G51340.2 )
(BLAST)

001: MMSEDGYNTD FPRNPLYIFF SDFRSVLKFD ELGLEIARIA LPAALALTAD PIASLVDTAF IGQIGPVELA AVGVSIALFN QVSRIAIFPL VSITTSFVAE
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS

Arabidopsis Description

DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.