Factsheet for Bra001282.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 6
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra020182.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G08040.1	Bra002403.1-P	AT5G22290.1	21798944
AT3G08040.1	Bra006619.1-P	AT5G22290.1	21798944
AT3G08040.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74015	Canola	plasma membrane	100.0	100.0
Bra001283.1-P	Field mustard	plasma membrane	94.53	91.49
Bra040047.1-P	Field mustard	cytosol, plasma membrane, vacuole	88.67	85.98
AT3G08040.1	Thale cress	cytosol, plasma membrane, vacuole	84.57	82.32
CDX74016	Canola	extracellular, plasma membrane, vacuole	22.07	81.88
Bra029694.1-P	Field mustard	plasma membrane	83.98	80.22
KRH27482	Soybean	plasma membrane	38.48	61.76
VIT_13s0064g00930.t01	Wine grape	plasma membrane	64.06	61.19
VIT_13s0064g00940.t01	Wine grape	plasma membrane	62.7	58.68
Solyc01g087150.2.1	Tomato	plasma membrane	59.57	58.1
PGSC0003DMT400017700	Potato	plasma membrane	60.16	57.36
PGSC0003DMT400017707	Potato	cytosol, plasma membrane, vacuole	59.38	56.61
KRH13953	Soybean	plasma membrane	60.94	56.42
KRH37984	Soybean	cytosol, plasma membrane, vacuole	60.94	56.12
GSMUA_Achr3P29780_001	Banana	plasma membrane	56.25	55.6
GSMUA_Achr4P06960_001	Banana	plasma membrane	54.1	55.18
Bra030446.1-P	Field mustard	plasma membrane	54.88	54.35
TraesCS1A01G305200.1	Wheat	plasma membrane	52.54	54.12
TraesCS1D01G304800.1	Wheat	plasma membrane	52.34	53.92
KRH27481	Soybean	plasma membrane	55.08	53.92
EES14441	Sorghum	plasma membrane	55.27	53.9
TraesCS1B01G315900.1	Wheat	plasma membrane	52.15	53.72
Bra014272.1-P	Field mustard	plasma membrane	54.3	53.56
KRH20827	Soybean	cytosol, plasma membrane, vacuole	43.55	52.1
HORVU1Hr1G068960.15	Barley	plasma membrane	52.34	52.04
Zm00001d035115_P004	Maize	plasma membrane	51.95	43.25
Zm00001d025649_P001	Maize	plasma membrane	14.45	39.36
Zm00001d042411_P001	Maize	plastid	18.75	37.07
Bra000055.1-P	Field mustard	plastid	35.94	36.08
Zm00001d007814_P001	Maize	mitochondrion	19.92	35.54
Bra010745.1-P	Field mustard	plastid	36.91	35.2
Bra000583.1-P	Field mustard	plastid	21.48	21.36
Bra031182.1-P	Field mustard	plastid	22.85	21.2
Bra011880.1-P	Field mustard	mitochondrion	19.92	18.96

Protein Annotations

MapMan:24.2.4.1.1	MapMan:24.2.4.1.3	MapMan:25.4.6.1	EnsemblPlantsGene:Bra001282	EnsemblPlants:Bra001282.1	EnsemblPlants:Bra001282.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
UniProt:M4CAQ3	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF7	TIGRFAMs:TIGR00797
TMHMM:TMhelix	UniParc:UPI0002540540	SEG:seg	:	:	:

Description

AT3G08040 (E=1e-165) FRD3, MAN1 | FRD3 (FERRIC REDUCTASE DEFECTIVE 3); antiporter/ transporter

Coordinates

chrA03:-:15639067..15642182

Molecular Weight (calculated)

54116.0 Da

IEP (calculated)

9.763

GRAVY (calculated)

0.660

Length

512 amino acids

Sequence
(BLAST)

001: MTETGDLTSV PASVVTQIPF LVIFNELTRV FSKDAIGREI LGIAFPAALA LAADPIASLI DTAYIGRLGA VELAAVGVSI AIFNQASRIT IFPIVSVTTS
101: FVAEENTMEK IKEEEEEAKK NNRVHANTLA VQDSLEKGIA SPTSNNMNQP QQTPASDTKS SSGNKANKKG KKNIKSASTA MIIGLILGLV QAIFLIFSSK
201: VLLGVMGVKP NSAVLSPAHK YLTIRSLGAP ALLLSLSMQG IFRGFKDTKT PLYATIVADV INIILDPIFI FVLHLGISGA AIAHVISQYF MTLILFTRLA
301: SKVNLMPPNF AALQFGKFLK NGGLLLARTI AVTFCQTLAA AMAARLGATP MAAFQICLQV WLTTSLLADG LAVAGQAILA CSFTEKDYNK VSSCASRVLQ
401: MGFVLGLGLS VFVGLGLYFG AGIFTKDPAV IHLIAIGIPF VAATQPINSL AFVLDGVNFG ASDFAYTAYS MVGVAAISIA AIIYMAKFNG FLGIWIALTI
501: YMGLRAITGI AR

Best Arabidopsis Sequence Match ( AT3G08040.1 )
(BLAST)

001: MTETGDDLAT VKKPIPFLVI FKDLRHVFSR DTTGREILGI AFPAALALAA DPIASLIDTA FVGRLGAVQL AAVGVSIAIF NQASRITIFP LVSLTTSFVA
101: EEDTMEKMKE EANKANLVHA ETILVQDSLE KGISSPTSND TNQPQQPPAP DTKSNSGNKS NKKEKRTIRT ASTAMILGLI LGLVQAIFLI FSSKLLLGVM
201: GVKPNSPMLS PAHKYLSIRA LGAPALLLSL AMQGIFRGFK DTKTPLFATV VADVINIVLD PIFIFVLRLG IIGAAIAHVI SQYFMTLILF VFLAKKVNLI
301: PPNFGDLQFG RFLKNGLLLL ARTIAVTFCQ TLAAAMAARL GTTPMAAFQI CLQVWLTSSL LNDGLAVAGQ AILACSFAEK DYNKVTAVAS RVLQMGFVLG
401: LGLSVFVGLG LYFGAGVFSK DPAVIHLMAI GIPFIAATQP INSLAFVLDG VNFGASDFAY TAYSMVGVAA ISIAAVIYMA KTNGFIGIWI ALTIYMALRA
501: ITGIARMATG TGPWRFLRGR SSSSSS

Arabidopsis Description

DTX43Protein DETOXIFICATION 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFB0]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.