Factsheet for Bra029694.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
golgi 1
plasma membrane 3
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra020182.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G08040.1	Bra002403.1-P	AT5G22290.1	21798944
AT3G08040.1	Bra006619.1-P	AT5G22290.1	21798944
AT3G08040.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35980	Canola	plasma membrane	99.81	99.81
Bra040047.1-P	Field mustard	cytosol, plasma membrane, vacuole	83.4	84.66
Bra001283.1-P	Field mustard	plasma membrane	83.02	84.12
Bra001282.1-P	Field mustard	plasma membrane	80.22	83.98
AT3G08040.1	Thale cress	cytosol, plasma membrane, vacuole	80.41	81.94
KRH27482	Soybean	plasma membrane	39.37	66.14
VIT_13s0064g00930.t01	Wine grape	plasma membrane	63.25	63.25
VIT_13s0064g00940.t01	Wine grape	plasma membrane	63.62	62.34
Solyc01g087150.2.1	Tomato	plasma membrane	58.96	60.19
PGSC0003DMT400017700	Potato	plasma membrane	59.7	59.59
PGSC0003DMT400017707	Potato	cytosol, plasma membrane, vacuole	59.51	59.4
KRH13953	Soybean	plasma membrane	60.07	58.23
KRH37984	Soybean	cytosol, plasma membrane, vacuole	60.07	57.91
GSMUA_Achr4P06960_001	Banana	plasma membrane	53.73	57.37
KRH27481	Soybean	plasma membrane	53.92	55.26
GSMUA_Achr3P29780_001	Banana	plasma membrane	53.17	55.02
Bra030446.1-P	Field mustard	plasma membrane	52.61	54.55
EES14441	Sorghum	plasma membrane	53.36	54.48
Bra014272.1-P	Field mustard	plasma membrane	52.24	53.95
TraesCS1A01G305200.1	Wheat	plasma membrane	50.0	53.92
TraesCS1D01G304800.1	Wheat	plasma membrane	50.0	53.92
TraesCS1B01G315900.1	Wheat	plasma membrane	49.81	53.72
HORVU1Hr1G068960.15	Barley	plasma membrane	49.81	51.84
KRH20827	Soybean	cytosol, plasma membrane, vacuole	40.67	50.93
Zm00001d035115_P004	Maize	plasma membrane	50.37	43.9
Zm00001d025649_P001	Maize	plasma membrane	14.18	40.43
Zm00001d042411_P001	Maize	plastid	17.72	36.68
Zm00001d007814_P001	Maize	mitochondrion	19.4	36.24
Bra000055.1-P	Field mustard	plastid	34.33	36.08
Bra010745.1-P	Field mustard	plastid	34.51	34.45
Bra000583.1-P	Field mustard	plastid	19.96	20.78
Bra031182.1-P	Field mustard	plastid	21.08	20.47
Bra011880.1-P	Field mustard	mitochondrion	19.59	19.52

Protein Annotations

MapMan:24.2.4.1.1	MapMan:24.2.4.1.3	MapMan:25.4.6.1	EnsemblPlantsGene:Bra029694	EnsemblPlants:Bra029694.1	EnsemblPlants:Bra029694.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
UniProt:M4ELM6	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF7	TIGRFAMs:TIGR00797
TMHMM:TMhelix	UniParc:UPI0002547DEA	SEG:seg	:	:	:

Description

AT3G08040 (E=7e-189) FRD3, MAN1 | FRD3 (FERRIC REDUCTASE DEFECTIVE 3); antiporter/ transporter

Coordinates

chrA05:+:22625682..22629133

Molecular Weight (calculated)

56748.1 Da

IEP (calculated)

10.020

GRAVY (calculated)

0.551

Length

536 amino acids

Sequence
(BLAST)

001: MTETGDLNSV PAIGIRPFPF LFIFKDLTHV FSMDPIGREI LSMAFPAALA LASDPVASLI DTAFIGRLGA VELAAVGVSI AIFQQASRIT IFPIVSVTTS
101: FVAEEDTLEK IKEEEEEANK AKNVHANTLA IQDSLEKGVT STTSNNKNQP QQTPVDVKLT SDTKSNNGNK ANKKGKKTIK SASTAMIIGL TLGLVQAIVL
201: IFSSKVLIGI MGVKPNSAVL SPAQKYLTIR ALGAPALLLS LSMQGIFRGF KDTKTPLYAT VASDGLNIIL DPIFIFVLRL GVSGAAIAHV ISQYFMLLIL
301: LIRLAKEVNL MPPKFGDLQF GKFIRNGGLM LARTIAVTFC QTLAASMAAR LGTTPMAAFQ ICLQVWLTSS MLADGLAVAG QAILACNFAE KDYNKVTAAA
401: SRVIQMSLVL GLGLSVFVGL GLYFGSGVFS KDPAVIHLIA IGIPFVAATQ PINSLTFVLD GVNFGASDFA YTAYSMVGVA AVSIAAVIYM AKVNGFVGIW
501: IALTIYMGLR AVTGIGRMAT GTGPWKFLRG RSPSSS

Best Arabidopsis Sequence Match ( AT3G08040.1 )
(BLAST)

001: MTETGDDLAT VKKPIPFLVI FKDLRHVFSR DTTGREILGI AFPAALALAA DPIASLIDTA FVGRLGAVQL AAVGVSIAIF NQASRITIFP LVSLTTSFVA
101: EEDTMEKMKE EANKANLVHA ETILVQDSLE KGISSPTSND TNQPQQPPAP DTKSNSGNKS NKKEKRTIRT ASTAMILGLI LGLVQAIFLI FSSKLLLGVM
201: GVKPNSPMLS PAHKYLSIRA LGAPALLLSL AMQGIFRGFK DTKTPLFATV VADVINIVLD PIFIFVLRLG IIGAAIAHVI SQYFMTLILF VFLAKKVNLI
301: PPNFGDLQFG RFLKNGLLLL ARTIAVTFCQ TLAAAMAARL GTTPMAAFQI CLQVWLTSSL LNDGLAVAGQ AILACSFAEK DYNKVTAVAS RVLQMGFVLG
401: LGLSVFVGLG LYFGAGVFSK DPAVIHLMAI GIPFIAATQP INSLAFVLDG VNFGASDFAY TAYSMVGVAA ISIAAVIYMA KTNGFIGIWI ALTIYMALRA
501: ITGIARMATG TGPWRFLRGR SSSSSS

Arabidopsis Description

DTX43Protein DETOXIFICATION 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFB0]
SUBAcon: [cytosol,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.