Factsheet for Bra040047.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra020182.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G08040.1	Bra002403.1-P	AT5G22290.1	21798944
AT3G08040.1	Bra006619.1-P	AT5G22290.1	21798944
AT3G08040.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22150	Canola	cytosol, plasma membrane, vacuole	100.0	100.0
Bra001283.1-P	Field mustard	plasma membrane	89.96	89.79
Bra001282.1-P	Field mustard	plasma membrane	85.98	88.67
AT3G08040.1	Thale cress	cytosol, plasma membrane, vacuole	83.14	83.46
Bra029694.1-P	Field mustard	plasma membrane	84.66	83.4
KRH27482	Soybean	plasma membrane	38.83	64.26
VIT_13s0064g00930.t01	Wine grape	plasma membrane	62.31	61.38
VIT_13s0064g00940.t01	Wine grape	plasma membrane	63.26	61.06
Solyc01g087150.2.1	Tomato	plasma membrane	60.23	60.57
PGSC0003DMT400017700	Potato	plasma membrane	60.42	59.4
PGSC0003DMT400017707	Potato	cytosol, plasma membrane, vacuole	59.85	58.85
KRH13953	Soybean	plasma membrane	60.42	57.69
KRH37984	Soybean	cytosol, plasma membrane, vacuole	60.23	57.19
GSMUA_Achr4P06960_001	Banana	plasma membrane	53.22	55.98
KRH27481	Soybean	plasma membrane	55.3	55.83
GSMUA_Achr3P29780_001	Banana	plasma membrane	54.36	55.41
Bra030446.1-P	Field mustard	plasma membrane	54.17	55.32
Bra014272.1-P	Field mustard	plasma membrane	53.22	54.14
EES14441	Sorghum	plasma membrane	53.79	54.1
TraesCS1A01G305200.1	Wheat	plasma membrane	50.57	53.72
TraesCS1D01G304800.1	Wheat	plasma membrane	50.38	53.52
TraesCS1B01G315900.1	Wheat	plasma membrane	50.19	53.32
HORVU1Hr1G068960.15	Barley	plasma membrane	50.38	51.65
KRH20827	Soybean	cytosol, plasma membrane, vacuole	41.48	51.17
Zm00001d035115_P004	Maize	plasma membrane	50.57	43.41
Zm00001d025649_P001	Maize	plasma membrane	14.2	39.89
Bra000055.1-P	Field mustard	plastid	35.98	37.25
Zm00001d007814_P001	Maize	mitochondrion	19.7	36.24
Zm00001d042411_P001	Maize	plastid	17.61	35.91
Bra010745.1-P	Field mustard	plastid	35.8	35.2
Bra031182.1-P	Field mustard	plastid	21.78	20.83
Bra000583.1-P	Field mustard	plastid	20.27	20.78
Bra011880.1-P	Field mustard	mitochondrion	19.32	18.96

Protein Annotations

MapMan:24.2.4.1.3	MapMan:25.4.6.1	EnsemblPlantsGene:Bra040047	EnsemblPlants:Bra040047.1	EnsemblPlants:Bra040047.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238
GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4FG22	InterPro:MATE_fam
PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF7	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002544586
SEG:seg	:	:	:	:	:

Description

AT3G08040 (E=4e-189) FRD3, MAN1 | FRD3 (FERRIC REDUCTASE DEFECTIVE 3); antiporter/ transporter

Coordinates

chrA01:+:27782496..27785952

Molecular Weight (calculated)

55660.8 Da

IEP (calculated)

10.027

GRAVY (calculated)

0.637

Length

528 amino acids

Sequence
(BLAST)

001: MTEAGDLTSV PNSVIKPFPF LVIFKDLKHV FSMDAIGREI LSMAFPAALA FAADPIASLI DTAYIGRLGA VELAALGVSI AIFNQASRIT IFPVVSVTTS
101: FVAEEDTMEK MKEDEANKAI THANTSAVQD SLEKGVASPA SNNTSQPQQT PASDTKPSSG NKAKKKGKKN IKSASTAMII GLILGLVQAI ALIFSSKVLL
201: GVMGVKPNSA VLSPAHKYLT IRSLGSPALL LSLSMQGIFR GFKDTKTPLY ATVVADVINI ILDPIFIFVL HLGVSGAAIA HVISQYFMTL ILFIRLASKV
301: NLMPPNFGEL QFGKFLKSGG LLLARTVAVT FCQTLAAAVM ARLGTTPMAA FQICLQVWLT TSLLADGLAV AGQAILACSF AEKDYNKVTA ATSRVLQMGF
401: VLGLGLSVFV GLGLYFGAGV FSKDAAVIHL IAIGIPFVAA TQPINSIAFV LDGVNFGASD FAYTAYSMVG VAAITIAAII YMAKFYGFLG IWIALTIYMG
501: LRTVTGIARI ATGTGPWKFL RGRSPSSS

Best Arabidopsis Sequence Match ( AT3G08040.1 )
(BLAST)

001: MTETGDDLAT VKKPIPFLVI FKDLRHVFSR DTTGREILGI AFPAALALAA DPIASLIDTA FVGRLGAVQL AAVGVSIAIF NQASRITIFP LVSLTTSFVA
101: EEDTMEKMKE EANKANLVHA ETILVQDSLE KGISSPTSND TNQPQQPPAP DTKSNSGNKS NKKEKRTIRT ASTAMILGLI LGLVQAIFLI FSSKLLLGVM
201: GVKPNSPMLS PAHKYLSIRA LGAPALLLSL AMQGIFRGFK DTKTPLFATV VADVINIVLD PIFIFVLRLG IIGAAIAHVI SQYFMTLILF VFLAKKVNLI
301: PPNFGDLQFG RFLKNGLLLL ARTIAVTFCQ TLAAAMAARL GTTPMAAFQI CLQVWLTSSL LNDGLAVAGQ AILACSFAEK DYNKVTAVAS RVLQMGFVLG
401: LGLSVFVGLG LYFGAGVFSK DPAVIHLMAI GIPFIAATQP INSLAFVLDG VNFGASDFAY TAYSMVGVAA ISIAAVIYMA KTNGFIGIWI ALTIYMALRA
501: ITGIARMATG TGPWRFLRGR SSSSSS

Arabidopsis Description

DTX43Protein DETOXIFICATION 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFB0]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.