Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G08040.1 | KRH22653 | AT5G22290.1 | 21798944 |
| AT3G08040.1 | KRH26664 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH13953 | Soybean | plasma membrane | 94.42 | 94.94 |
| KRH27482 | Soybean | plasma membrane | 46.94 | 81.82 |
| KRH27481 | Soybean | plasma membrane | 65.83 | 69.98 |
| KRH20827 | Soybean | cytosol, plasma membrane, vacuole | 52.7 | 68.46 |
| CDX74016 | Canola | extracellular, plasma membrane, vacuole | 16.19 | 65.22 |
| VIT_13s0064g00930.t01 | Wine grape | plasma membrane | 61.87 | 64.18 |
| VIT_13s0064g00940.t01 | Wine grape | plasma membrane | 62.59 | 63.62 |
| AT3G08040.1 | Thale cress | cytosol, plasma membrane, vacuole | 58.81 | 62.17 |
| CDY07957 | Canola | plasma membrane | 58.27 | 61.25 |
| CDX74014 | Canola | plasma membrane | 58.09 | 61.06 |
| Bra001283.1-P | Field mustard | plasma membrane | 58.09 | 61.06 |
| CDY07959 | Canola | plasma membrane | 58.27 | 61.02 |
| Bra001282.1-P | Field mustard | plasma membrane | 56.12 | 60.94 |
| CDX74015 | Canola | plasma membrane | 56.12 | 60.94 |
| CDY28001 | Canola | plasma membrane | 57.73 | 60.57 |
| Bra040047.1-P | Field mustard | cytosol, plasma membrane, vacuole | 57.19 | 60.23 |
| CDY22150 | Canola | cytosol, plasma membrane, vacuole | 57.19 | 60.23 |
| CDY35980 | Canola | plasma membrane | 57.91 | 60.07 |
| Bra029694.1-P | Field mustard | plasma membrane | 57.91 | 60.07 |
| CDY27977 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 22.12 | 60.0 |
| Solyc01g087150.2.1 | Tomato | plasma membrane | 56.47 | 59.81 |
| PGSC0003DMT400017700 | Potato | plasma membrane | 57.73 | 59.78 |
| KRH71966 | Soybean | extracellular, golgi | 22.3 | 59.62 |
| PGSC0003DMT400017707 | Potato | cytosol, plasma membrane, vacuole | 57.37 | 59.4 |
| KRH29719 | Soybean | extracellular | 13.31 | 59.2 |
| GSMUA_Achr4P06960_001 | Banana | plasma membrane | 53.06 | 58.76 |
| GSMUA_Achr3P29780_001 | Banana | plasma membrane | 54.5 | 58.49 |
| KRH25702 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 21.58 | 57.69 |
| KRH10205 | Soybean | plasma membrane | 55.58 | 55.78 |
| KRH23130 | Soybean | plasma membrane | 55.4 | 55.5 |
| TraesCS1A01G305200.1 | Wheat | plasma membrane | 48.74 | 54.53 |
| EES14441 | Sorghum | plasma membrane | 51.44 | 54.48 |
| TraesCS1D01G304800.1 | Wheat | plasma membrane | 48.56 | 54.33 |
| KRH33105 | Soybean | plasma membrane | 48.92 | 54.29 |
| TraesCS1B01G315900.1 | Wheat | plasma membrane | 47.84 | 53.52 |
| HORVU1Hr1G068960.15 | Barley | plasma membrane | 48.92 | 52.82 |
| KRH71965 | Soybean | plasma membrane | 26.44 | 50.52 |
| KRH27483 | Soybean | cytosol | 19.24 | 49.08 |
| Zm00001d035115_P004 | Maize | plasma membrane | 48.02 | 43.41 |
| KRG96963 | Soybean | plasma membrane | 20.32 | 41.39 |
| KRH49460 | Soybean | plastid | 38.31 | 39.52 |
| CDY27978 | Canola | plasma membrane | 31.12 | 37.77 |
| Zm00001d025649_P001 | Maize | plasma membrane | 12.77 | 37.77 |
| KRH74091 | Soybean | plasma membrane | 33.45 | 35.36 |
| Zm00001d007814_P001 | Maize | mitochondrion | 17.99 | 34.84 |
| Zm00001d042411_P001 | Maize | plastid | 16.01 | 34.36 |
| KRH14024 | Soybean | plasma membrane | 33.81 | 33.63 |
| KRH00327 | Soybean | plastid | 33.99 | 31.87 |
| KRH29368 | Soybean | plastid | 19.42 | 19.78 |
| KRH29367 | Soybean | plastid | 19.42 | 19.71 |
| KRH24389 | Soybean | extracellular | 3.24 | 15.13 |
Protein Annotations
| EntrezGene:100303753 | MapMan:24.2.4.1.3 | MapMan:25.4.6.1 | EMBL:ACUP02005576 | ncoils:Coil | EnsemblPlantsGene:GLYMA_09G102800 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006855 | GO:GO:0008150 |
| GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | UniProt:K7LCZ5 |
| EnsemblPlants:KRH37984 | ProteinID:KRH37984 | ProteinID:KRH37984.1 | InterPro:MATE_fam | PFAM:PF01554 | PANTHER:PTHR42893 |
| PANTHER:PTHR42893:SF7 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI00029559A5 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:+:18848635..18853493
Molecular Weight (calculated)
59870.9 Da
IEP (calculated)
9.893
GRAVY (calculated)
0.497
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MVINIKQAYF FILMDIMDEN GSSSNAPKNK RNLPVSVFFK DARHVFKMDS IAKEILGIAF PSALAVAADP IASLIDTAFI GHLGPVELAA AGVSIALFNQ
101: ASRITIFPLV SITTSFVAEE NTIEKINTEK KLSDKAKSKE QVMLDDHSLQ DIEKVASKEN NETENVEMND CNTSICKSTS DTSSSSSNKS VPKDGRKKRH
201: VASASTALLF GTILGLLQAT TLIFAAKPLL AAMGLKPDSP MLNPAIKYLR LRSLGAPAVL LSLAMQGIFR GFKDTTTPLY VILSGYALNV ILDPVLIFYC
301: KLGIKGAAIS HVLSQYLMAL ALMVILTRKV DLVPPSIKDL QIFRFLKNGG LLLARVIAVT FCQTLAASLA ARFGPIPMAA FQTCLQVWLT SSLLADGLAV
401: AVQAILACSF AEKDYEKVLV AATRTLQMSF VLGVGLSFAV GFGLYFGAGI FSKSVLVVHL IRIGLPFVAA TQPINSLAFV FDGVNYGASD FAYSAYSLVT
501: VSLASVASLF LLSKSKGFVG IWIALTIYMS LRMFAGVWRM GTGTGPWRFL RGRSMS
101: ASRITIFPLV SITTSFVAEE NTIEKINTEK KLSDKAKSKE QVMLDDHSLQ DIEKVASKEN NETENVEMND CNTSICKSTS DTSSSSSNKS VPKDGRKKRH
201: VASASTALLF GTILGLLQAT TLIFAAKPLL AAMGLKPDSP MLNPAIKYLR LRSLGAPAVL LSLAMQGIFR GFKDTTTPLY VILSGYALNV ILDPVLIFYC
301: KLGIKGAAIS HVLSQYLMAL ALMVILTRKV DLVPPSIKDL QIFRFLKNGG LLLARVIAVT FCQTLAASLA ARFGPIPMAA FQTCLQVWLT SSLLADGLAV
401: AVQAILACSF AEKDYEKVLV AATRTLQMSF VLGVGLSFAV GFGLYFGAGI FSKSVLVVHL IRIGLPFVAA TQPINSLAFV FDGVNYGASD FAYSAYSLVT
501: VSLASVASLF LLSKSKGFVG IWIALTIYMS LRMFAGVWRM GTGTGPWRFL RGRSMS
001: MTETGDDLAT VKKPIPFLVI FKDLRHVFSR DTTGREILGI AFPAALALAA DPIASLIDTA FVGRLGAVQL AAVGVSIAIF NQASRITIFP LVSLTTSFVA
101: EEDTMEKMKE EANKANLVHA ETILVQDSLE KGISSPTSND TNQPQQPPAP DTKSNSGNKS NKKEKRTIRT ASTAMILGLI LGLVQAIFLI FSSKLLLGVM
201: GVKPNSPMLS PAHKYLSIRA LGAPALLLSL AMQGIFRGFK DTKTPLFATV VADVINIVLD PIFIFVLRLG IIGAAIAHVI SQYFMTLILF VFLAKKVNLI
301: PPNFGDLQFG RFLKNGLLLL ARTIAVTFCQ TLAAAMAARL GTTPMAAFQI CLQVWLTSSL LNDGLAVAGQ AILACSFAEK DYNKVTAVAS RVLQMGFVLG
401: LGLSVFVGLG LYFGAGVFSK DPAVIHLMAI GIPFIAATQP INSLAFVLDG VNFGASDFAY TAYSMVGVAA ISIAAVIYMA KTNGFIGIWI ALTIYMALRA
501: ITGIARMATG TGPWRFLRGR SSSSSS
101: EEDTMEKMKE EANKANLVHA ETILVQDSLE KGISSPTSND TNQPQQPPAP DTKSNSGNKS NKKEKRTIRT ASTAMILGLI LGLVQAIFLI FSSKLLLGVM
201: GVKPNSPMLS PAHKYLSIRA LGAPALLLSL AMQGIFRGFK DTKTPLFATV VADVINIVLD PIFIFVLRLG IIGAAIAHVI SQYFMTLILF VFLAKKVNLI
301: PPNFGDLQFG RFLKNGLLLL ARTIAVTFCQ TLAAAMAARL GTTPMAAFQI CLQVWLTSSL LNDGLAVAGQ AILACSFAEK DYNKVTAVAS RVLQMGFVLG
401: LGLSVFVGLG LYFGAGVFSK DPAVIHLMAI GIPFIAATQP INSLAFVLDG VNFGASDFAY TAYSMVGVAA ISIAAVIYMA KTNGFIGIWI ALTIYMALRA
501: ITGIARMATG TGPWRFLRGR SSSSSS
Arabidopsis Description
DTX43Protein DETOXIFICATION 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFB0]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.