Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G08040.1 | KRH22653 | AT5G22290.1 | 21798944 |
AT3G08040.1 | KRH26664 | AT5G22290.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX74016 | Canola | extracellular, plasma membrane, vacuole | 26.33 | 60.87 |
CDY27977 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 36.99 | 57.56 |
KRH29719 | Soybean | extracellular | 22.26 | 56.8 |
KRH71966 | Soybean | extracellular, golgi | 36.68 | 56.25 |
KRH25702 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 35.11 | 53.85 |
KRH27481 | Soybean | plasma membrane | 82.76 | 50.48 |
KRH13953 | Soybean | plasma membrane | 81.82 | 47.2 |
KRH37984 | Soybean | cytosol, plasma membrane, vacuole | 81.82 | 46.94 |
VIT_13s0064g00930.t01 | Wine grape | plasma membrane | 72.41 | 43.1 |
VIT_13s0064g00940.t01 | Wine grape | plasma membrane | 70.85 | 41.32 |
AT3G08040.1 | Thale cress | cytosol, plasma membrane, vacuole | 67.4 | 40.87 |
PGSC0003DMT400017700 | Potato | plasma membrane | 67.71 | 40.22 |
Solyc01g087150.2.1 | Tomato | plasma membrane | 66.14 | 40.19 |
CDY28001 | Canola | plasma membrane | 66.46 | 40.0 |
CDY07957 | Canola | plasma membrane | 65.83 | 39.7 |
GSMUA_Achr4P06960_001 | Banana | plasma membrane | 62.38 | 39.64 |
CDX74014 | Canola | plasma membrane | 65.52 | 39.51 |
Bra001283.1-P | Field mustard | plasma membrane | 65.52 | 39.51 |
Bra029694.1-P | Field mustard | plasma membrane | 66.14 | 39.37 |
CDY35980 | Canola | plasma membrane | 66.14 | 39.37 |
GSMUA_Achr3P29780_001 | Banana | plasma membrane | 63.64 | 39.19 |
PGSC0003DMT400017707 | Potato | cytosol, plasma membrane, vacuole | 65.83 | 39.11 |
CDY07959 | Canola | plasma membrane | 64.89 | 38.98 |
TraesCS1D01G304800.1 | Wheat | plasma membrane | 60.5 | 38.83 |
KRG96963 | Soybean | plasma membrane | 33.23 | 38.83 |
Bra040047.1-P | Field mustard | cytosol, plasma membrane, vacuole | 64.26 | 38.83 |
CDY22150 | Canola | cytosol, plasma membrane, vacuole | 64.26 | 38.83 |
TraesCS1B01G315900.1 | Wheat | plasma membrane | 60.19 | 38.63 |
Bra001282.1-P | Field mustard | plasma membrane | 61.76 | 38.48 |
CDX74015 | Canola | plasma membrane | 61.76 | 38.48 |
TraesCS1A01G305200.1 | Wheat | plasma membrane | 59.87 | 38.43 |
KRH20827 | Soybean | cytosol, plasma membrane, vacuole | 51.41 | 38.32 |
HORVU1Hr1G068960.15 | Barley | plasma membrane | 60.5 | 37.48 |
EES14441 | Sorghum | plasma membrane | 61.44 | 37.33 |
KRH33105 | Soybean | plasma membrane | 57.37 | 36.53 |
KRH10205 | Soybean | plasma membrane | 62.7 | 36.1 |
KRH23130 | Soybean | plasma membrane | 62.38 | 35.86 |
Zm00001d025649_P001 | Maize | plasma membrane | 19.44 | 32.98 |
Zm00001d042411_P001 | Maize | plastid | 26.65 | 32.82 |
Zm00001d007814_P001 | Maize | mitochondrion | 26.65 | 29.62 |
Zm00001d035115_P004 | Maize | plasma membrane | 55.49 | 28.78 |
KRH49460 | Soybean | plastid | 46.08 | 27.27 |
KRH74091 | Soybean | plasma membrane | 39.81 | 24.14 |
KRH14024 | Soybean | plasma membrane | 40.13 | 22.9 |
KRH71965 | Soybean | plasma membrane | 20.06 | 21.99 |
KRH00327 | Soybean | plastid | 40.75 | 21.92 |
CDY27978 | Canola | plasma membrane | 21.32 | 14.85 |
KRH24389 | Soybean | extracellular | 5.02 | 13.45 |
KRH29367 | Soybean | plastid | 21.32 | 12.41 |
KRH29368 | Soybean | plastid | 21.0 | 12.27 |
KRH27483 | Soybean | cytosol | 7.52 | 11.01 |
Protein Annotations
MapMan:24.2.4.1.3 | MapMan:25.4.6.1 | UniProt:A0A0R0HA78 | EMBL:ACUP02007806 | EnsemblPlantsGene:GLYMA_12G2374003 | GO:GO:0003674 |
GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 |
GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | EnsemblPlants:KRH27482 | ProteinID:KRH27482 |
ProteinID:KRH27482.1 | InterPro:MATE_fam | PFAM:PF01554 | PANTHER:PTHR42893 | PANTHER:PTHR42893:SF7 | TIGRFAMs:TIGR00797 |
TMHMM:TMhelix | UniParc:UPI0006ED5E96 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:39636021..39638578
Molecular Weight (calculated)
34409.2 Da
IEP (calculated)
9.961
GRAVY (calculated)
0.793
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: DSPMLNPAEK YLRLRSFGAP AVLLSLAMQG IFGGFKDTAT PLYVIVSGYS LNVILDPILI FTLKLGIEGA AIAHVLSQYM MAFTLLLILM KKVHLLPPSI
101: KDLQIFRFLK NGGFLMLRVI AVTFCVTLAA SLASRLGSIP MAAFQTCLQV WLTSSLLADG LAVAVQSILA CSFAEKDHKK TTAAATRTLQ MSFVLGVGLS
201: LAVGLGLYFG AGVFSRNVHV VHLIKIGIPF VAATQPINSL AFVFDGVNYG ASDFAYSAYS LVLVSLVSVA TELLLYRTKH FVGIWIALTI YMTLRMLAGV
301: CRMGTGTGPW RYLRDGSLP
101: KDLQIFRFLK NGGFLMLRVI AVTFCVTLAA SLASRLGSIP MAAFQTCLQV WLTSSLLADG LAVAVQSILA CSFAEKDHKK TTAAATRTLQ MSFVLGVGLS
201: LAVGLGLYFG AGVFSRNVHV VHLIKIGIPF VAATQPINSL AFVFDGVNYG ASDFAYSAYS LVLVSLVSVA TELLLYRTKH FVGIWIALTI YMTLRMLAGV
301: CRMGTGTGPW RYLRDGSLP
001: MATTQIFQET LYTFSLVISV LKFDELGLEI ARIALPAALA LTADPIASLV DTAFIGQIGP VELAAVGVSI ALFNQVSRIA IFPLVSITTS FVAEEDACSS
101: QQDTVRDHKE CIEIGINNPT EETIELIPEK HKDSLSDEFK TSSSIFSISK PPAKKRNIPS ASSALIIGGV LGLFQAVFLI SAAKPLLSFM GVKHDSPMMR
201: PSQRYLSLRS LGAPAVLLSL AAQGVFRGFK DTTTPLFATV IGDVTNIILD PIFIFVFRLG VTGAATAHVI SQYLMCGILL WKLMGQVDIF NMSTKHLQFC
301: RFMKNGFLLL MRVIAVTFCV TLSASLAARE GSTSMAAFQV CLQVWLATSL LADGYAVAGQ AILASAFAKK DYKRAAATAS RVLQLGLVLG FVLAVILGAG
401: LHFGARVFTK DDKVLHLISI GLPFVAGTQP INALAFVFDG VNFGASDFGY AAASLVMVAI VSILCLLFLS STHGFIGLWF GLTIYMSLRA AVGFWRIGTG
501: TGPWSFLRS
101: QQDTVRDHKE CIEIGINNPT EETIELIPEK HKDSLSDEFK TSSSIFSISK PPAKKRNIPS ASSALIIGGV LGLFQAVFLI SAAKPLLSFM GVKHDSPMMR
201: PSQRYLSLRS LGAPAVLLSL AAQGVFRGFK DTTTPLFATV IGDVTNIILD PIFIFVFRLG VTGAATAHVI SQYLMCGILL WKLMGQVDIF NMSTKHLQFC
301: RFMKNGFLLL MRVIAVTFCV TLSASLAARE GSTSMAAFQV CLQVWLATSL LADGYAVAGQ AILASAFAKK DYKRAAATAS RVLQLGLVLG FVLAVILGAG
401: LHFGARVFTK DDKVLHLISI GLPFVAGTQP INALAFVFDG VNFGASDFGY AAASLVMVAI VSILCLLFLS STHGFIGLWF GLTIYMSLRA AVGFWRIGTG
501: TGPWSFLRS
Arabidopsis Description
DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.