Factsheet for GSMUA_Achr4P06960_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P29780_001	Banana	plasma membrane	82.27	79.73
VIT_08s0007g08200.t01	Wine grape	plasma membrane	69.72	69.03
KRH71966	Soybean	extracellular, golgi	28.29	68.27
VIT_06s0004g02140.t01	Wine grape	cytosol, plasma membrane, vacuole	69.72	68.23
TraesCS1D01G304800.1	Wheat	plasma membrane	66.33	67.0
TraesCS1A01G305200.1	Wheat	plasma membrane	66.14	66.8
PGSC0003DMT400018991	Potato	cytosol, plasma membrane, vacuole	68.13	66.8
Solyc11g065820.1.1	Tomato	cytosol, plasma membrane, vacuole	67.13	66.08
TraesCS1B01G315900.1	Wheat	plasma membrane	65.34	66.0
EES14441	Sorghum	plasma membrane	68.53	65.52
Os10t0206800-01	Rice	plasma membrane	69.32	64.8
HORVU1Hr1G068960.15	Barley	plasma membrane	66.14	64.47
PGSC0003DMT400027815	Potato	cytosol, plasma membrane, vacuole	66.93	64.37
AT1G51340.2	Thale cress	plasma membrane	64.94	63.3
Bra014272.1-P	Field mustard	plasma membrane	65.34	63.2
Solyc01g008420.2.1	Tomato	plasma membrane	67.33	63.06
CDY66973	Canola	plasma membrane	64.94	63.06
Bra030446.1-P	Field mustard	plasma membrane	64.94	63.06
CDY65471	Canola	plasma membrane	65.14	62.88
CDY03629	Canola	plasma membrane	65.14	62.88
CDY01220	Canola	plasma membrane	64.74	62.86
CDY29628	Canola	plasma membrane	64.34	62.6
KRH29719	Soybean	extracellular	15.54	62.4
KRH27482	Soybean	plasma membrane	39.64	62.38
VIT_13s0064g00940.t01	Wine grape	plasma membrane	67.93	62.34
VIT_13s0064g00930.t01	Wine grape	plasma membrane	65.94	61.75
KRH25702	Soybean	cytosol, peroxisome, plasma membrane, plastid	25.5	61.54
GSMUA_Achr8P31410_001	Banana	cytosol, peroxisome, plasma membrane	59.76	60.85
KRH33105	Soybean	plasma membrane	60.56	60.68
KRH10205	Soybean	plasma membrane	66.14	59.93
KRH23130	Soybean	plasma membrane	65.94	59.64
Solyc01g087150.2.1	Tomato	plasma membrane	59.96	57.33
PGSC0003DMT400017707	Potato	cytosol, plasma membrane, vacuole	60.96	56.98
VIT_13s0019g05200.t01	Wine grape	cytosol	9.76	56.98
KRH71965	Soybean	plasma membrane	32.87	56.7
PGSC0003DMT400017700	Potato	plasma membrane	60.16	56.24
CDX74016	Canola	extracellular, plasma membrane, vacuole	15.34	55.8
KRH27481	Soybean	plasma membrane	57.17	54.88
AT3G08040.1	Thale cress	cytosol, plasma membrane, vacuole	57.37	54.75
CDX74014	Canola	plasma membrane	57.57	54.63
CDY07959	Canola	plasma membrane	57.77	54.61
Bra001283.1-P	Field mustard	plasma membrane	57.37	54.44
CDY07957	Canola	plasma membrane	57.37	54.44
CDY28001	Canola	plasma membrane	57.37	54.34
Bra001282.1-P	Field mustard	plasma membrane	55.18	54.1
CDX74015	Canola	plasma membrane	55.18	54.1
Bra029694.1-P	Field mustard	plasma membrane	57.37	53.73
CDY35980	Canola	plasma membrane	57.37	53.73
KRH13953	Soybean	plasma membrane	59.16	53.71
CDY27977	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.91	53.66
CDY22150	Canola	cytosol, plasma membrane, vacuole	55.98	53.22
Bra040047.1-P	Field mustard	cytosol, plasma membrane, vacuole	55.98	53.22
KRH37984	Soybean	cytosol, plasma membrane, vacuole	58.76	53.06
Zm00001d035115_P004	Maize	plasma membrane	63.94	52.2
KRH20827	Soybean	cytosol, plasma membrane, vacuole	41.63	48.83
KRG96963	Soybean	plasma membrane	24.3	44.69
GSMUA_AchrUn_...	Banana	plasma membrane	19.52	44.34
Zm00001d025649_P001	Maize	plasma membrane	16.33	43.62
GSMUA_Achr11P...	Banana	plastid	44.22	42.86
Zm00001d042411_P001	Maize	plastid	21.12	40.93
Zm00001d007814_P001	Maize	mitochondrion	22.71	39.72
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	21.12	38.83
CDY27978	Canola	plasma membrane	30.48	33.41
GSMUA_Achr1P16310_001	Banana	plasma membrane	19.52	23.11

Protein Annotations

MapMan:24.2.4.1.1	MapMan:24.2.4.1.3	MapMan:25.4.6.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr4G06960_001	EnsemblPlants:GSMUA_Achr4P06960_001	EnsemblPlants:GSMUA_Achr4T06960_001	UniProt:M0SLR3
InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF2	TIGRFAMs:TIGR00797	TMHMM:TMhelix
UniParc:UPI0002959EC7	SEG:seg	:	:	:	:

Description

MATE efflux protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G06960_001]

Coordinates

chr4:+:5196323..5204075

Molecular Weight (calculated)

53964.8 Da

IEP (calculated)

6.785

GRAVY (calculated)

0.697

Length

502 amino acids

Sequence
(BLAST)

001: MTSPLRVLFK DARHAFRLDE LGMEIMRIAF PAALALMADP VASLIDTAFI GHIGPVELAA VGVSIAVFNQ VSRIAIFPIV SVTTSFVAEE DATSKLASGD
101: PESGECQGSF SEDSEMKELM PCTDHDEHEY TSPFSSKKSA TMTEVENRKR IPSASSALLV GSVLGVLETL FLNFGAKPIL IFMGVKHDSP MLTPACEYLT
201: LRALGAPAVL LSLAMQGVFR GIRDTETPLY ATVAGDAANI ILDPIFIFLF RLGVSGAAIA HVISQYLIAL MLLWKLLRQV DVLPPSIKNL QFGRFLRDGL
301: LLLVRVIAVT FCVTLAASMA ARQGSVPMAA FQICLQIWLA TSLLADGLAV AGQAILASAF ARKDHSGATS AASRVLQWGM VLGLLLCFIL GIGLQFASKL
401: FTKDAKVLQL VHVGIPFVAL TQPMNALAFV FDGINYGASD FAYAAYSMVL VAIVSIVFLI ILSSSHGFVG IWIALTIYMS LRMLAGFWRI GTGTGPWTFL
501: WS

Best Arabidopsis Sequence Match ( AT1G51340.2 )
(BLAST)

001: MMSEDGYNTD FPRNPLYIFF SDFRSVLKFD ELGLEIARIA LPAALALTAD PIASLVDTAF IGQIGPVELA AVGVSIALFN QVSRIAIFPL VSITTSFVAE
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS

Arabidopsis Description

DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.