Factsheet for PGSC0003DMT400018991

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g065820.1.1	Tomato	cytosol, plasma membrane, vacuole	96.48	96.86
PGSC0003DMT400027815	Potato	cytosol, plasma membrane, vacuole	81.45	79.89
VIT_06s0004g02140.t01	Wine grape	cytosol, plasma membrane, vacuole	73.83	73.68
Os01t0162101-00	Rice	endoplasmic reticulum, extracellular	5.47	73.68
AT1G51340.2	Thale cress	plasma membrane	70.7	70.29
Bra030446.1-P	Field mustard	plasma membrane	70.9	70.21
CDY01220	Canola	plasma membrane	70.9	70.21
CDY66973	Canola	plasma membrane	70.9	70.21
CDY29628	Canola	plasma membrane	70.51	69.96
Bra014272.1-P	Field mustard	plasma membrane	70.51	69.56
CDY65471	Canola	plasma membrane	70.51	69.42
CDY03629	Canola	plasma membrane	70.31	69.23
GSMUA_Achr4P06960_001	Banana	plasma membrane	66.8	68.13
KRH29719	Soybean	extracellular	16.6	68.0
GSMUA_Achr3P29780_001	Banana	plasma membrane	68.16	67.37
KRH25702	Soybean	cytosol, peroxisome, plasma membrane, plastid	27.15	66.83
KRH23130	Soybean	plasma membrane	72.27	66.67
KRH10205	Soybean	plasma membrane	72.07	66.61
TraesCS1A01G305200.1	Wheat	plasma membrane	61.33	63.18
TraesCS1D01G304800.1	Wheat	plasma membrane	60.94	62.78
TraesCS1B01G315900.1	Wheat	plasma membrane	60.55	62.37
EES14441	Sorghum	plasma membrane	63.67	62.1
PGSC0003DMT400017707	Potato	cytosol, plasma membrane, vacuole	64.06	61.08
HORVU1Hr1G068960.15	Barley	plasma membrane	61.13	60.78
VIT_13s0019g05200.t01	Wine grape	cytosol	10.16	60.47
PGSC0003DMT400017700	Potato	plasma membrane	62.7	59.78
Zm00001d035115_P004	Maize	plasma membrane	60.35	50.24
KRG96963	Soybean	plasma membrane	25.78	48.35
Zm00001d025649_P001	Maize	plasma membrane	16.41	44.68
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	32.42	41.81
Zm00001d042411_P001	Maize	plastid	20.7	40.93
Zm00001d007814_P001	Maize	mitochondrion	22.85	40.77
PGSC0003DMT400047961	Potato	plastid	39.45	32.79
PGSC0003DMT400022359	Potato	plastid	37.3	31.94
PGSC0003DMT400008058	Potato	plastid	21.48	19.75
PGSC0003DMT400008050	Potato	mitochondrion, plasma membrane, plastid, vacuole	18.36	19.67
PGSC0003DMT400008778	Potato	plastid	20.7	19.49

Protein Annotations

EntrezGene:102598780	MapMan:24.2.4.1.1	MapMan:24.2.4.1.3	MapMan:25.4.6.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M1ABG4	InterPro:MATE_fam	PFAM:PF01554
EnsemblPlantsGene:PGSC0003DMG400007358	PGSC:PGSC0003DMG400007358	EnsemblPlants:PGSC0003DMT400018991	PANTHER:PTHR42893	PANTHER:PTHR42893:SF11	TIGRFAMs:TIGR00797
TMHMM:TMhelix	UniParc:UPI000296D3D9	RefSeq:XP_006361750.1	RefSeq:XP_015170935.1	RefSeq:XP_015170936.1	RefSeq:XP_015170937.1
SEG:seg	:	:	:	:	:

Description

Aluminum-activated citrate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400007358]

Coordinates

chr11:-:38092356..38098138

Molecular Weight (calculated)

55284.2 Da

IEP (calculated)

9.452

GRAVY (calculated)

0.616

Length

512 amino acids

Sequence
(BLAST)

001: MAEKEVPFCI FFREARSVFK LDELGREIAR IALPAALALT ADPIASLVDT AFIGQIGPVE LAAVGISIAV FNQASRIAIF PLVSVTTSFV AEEDAITKVS
101: PEPRDNESQD IQSQDVEGLD TESQSNSENK ELIPQNRSVY KSKTTATSFE VVKPKPEKKH IPSASSALII GAILGFIQAV FLISGAKPIL SFMGVKHGSP
201: MLKPAQEYLK LRSLGAPAVL LSLAMQGVFR GFKDTKTPLF ATVAGDLTNI ILDPIFIFAF HMGVRGAAIA HVISQYLISV ILFWRLMEKV DLLPPSLKYM
301: QFARFLTNGF LLLMRVIAVT FCVTLAASLA ARLGPTEMAA FQVCLQVWLT TSLLADGLAV AGQAILASAF AQNDFSRATA TASRVLQLGL VLGLVLALIL
401: GVGLHFGARL FTKDVNVIHL IGIGIPFVAA TQPINALAFV FDGVNFGASD FAYSAYSMVT VALFSIVFLF ILSSSYKFVG IWVALTIYMS LRALAGFWRI
501: GTRTGPWKFL KS

Best Arabidopsis Sequence Match ( AT1G51340.2 )
(BLAST)

001: MMSEDGYNTD FPRNPLYIFF SDFRSVLKFD ELGLEIARIA LPAALALTAD PIASLVDTAF IGQIGPVELA AVGVSIALFN QVSRIAIFPL VSITTSFVAE
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS

Arabidopsis Description

DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.