Factsheet for PGSC0003DMT400027815

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g008420.2.1	Tomato	plasma membrane	95.79	93.28
PGSC0003DMT400018991	Potato	cytosol, plasma membrane, vacuole	79.89	81.45
Os01t0162101-00	Rice	endoplasmic reticulum, extracellular	5.36	73.68
VIT_06s0004g02140.t01	Wine grape	cytosol, plasma membrane, vacuole	68.2	69.4
AT1G51340.2	Thale cress	plasma membrane	67.43	68.35
KRH29719	Soybean	extracellular	16.09	67.2
Bra030446.1-P	Field mustard	plasma membrane	66.48	67.12
CDY01220	Canola	plasma membrane	66.48	67.12
CDY66973	Canola	plasma membrane	66.48	67.12
CDY29628	Canola	plasma membrane	66.28	67.05
GSMUA_Achr4P06960_001	Banana	plasma membrane	64.37	66.93
GSMUA_Achr3P29780_001	Banana	plasma membrane	66.09	66.6
Bra014272.1-P	Field mustard	plasma membrane	66.09	66.47
CDY03629	Canola	plasma membrane	66.09	66.35
CDY65471	Canola	plasma membrane	66.09	66.35
KRH25702	Soybean	cytosol, peroxisome, plasma membrane, plastid	26.25	65.87
KRH23130	Soybean	plasma membrane	69.73	65.59
KRH10205	Soybean	plasma membrane	69.54	65.52
TraesCS1A01G305200.1	Wheat	plasma membrane	59.39	62.37
TraesCS1D01G304800.1	Wheat	plasma membrane	59.2	62.17
EES14441	Sorghum	plasma membrane	62.45	62.1
TraesCS1B01G315900.1	Wheat	plasma membrane	59.0	61.97
PGSC0003DMT400017707	Potato	cytosol, plasma membrane, vacuole	62.07	60.34
HORVU1Hr1G068960.15	Barley	plasma membrane	58.62	59.42
PGSC0003DMT400017700	Potato	plasma membrane	60.34	58.66
VIT_13s0019g05200.t01	Wine grape	cytosol	9.2	55.81
Zm00001d035115_P004	Maize	plasma membrane	59.39	50.41
KRG96963	Soybean	plasma membrane	25.48	48.72
Zm00001d025649_P001	Maize	plasma membrane	15.33	42.55
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	31.42	41.31
Zm00001d042411_P001	Maize	plastid	19.92	40.15
Zm00001d007814_P001	Maize	mitochondrion	21.84	39.72
PGSC0003DMT400047961	Potato	plastid	38.89	32.95
PGSC0003DMT400022359	Potato	plastid	36.02	31.44
PGSC0003DMT400008778	Potato	plastid	21.26	20.4
PGSC0003DMT400008050	Potato	mitochondrion, plasma membrane, plastid, vacuole	17.24	18.83
PGSC0003DMT400008058	Potato	plastid	19.73	18.49

Protein Annotations

EntrezGene:102593991	MapMan:24.2.4.1.1	MapMan:24.2.4.1.3	MapMan:25.4.6.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M1AQ73	InterPro:MATE_fam	PFAM:PF01554
EnsemblPlantsGene:PGSC0003DMG400010706	PGSC:PGSC0003DMG400010706	EnsemblPlants:PGSC0003DMT400027815	PANTHER:PTHR42893	PANTHER:PTHR42893:SF11	TIGRFAMs:TIGR00797
TMHMM:TMhelix	UniParc:UPI000294BE14	RefSeq:XP_006366538.1	SEG:seg	:	:

Description

Aluminum-activated citrate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400010706]

Coordinates

chr1:+:4191121..4199105

Molecular Weight (calculated)

55931.9 Da

IEP (calculated)

7.390

GRAVY (calculated)

0.592

Length

522 amino acids

Sequence
(BLAST)

001: MEEKEVSCRE DVKSPLSIFF RDIRSIFKLD ELGQEIGRIA LPAALALTAD PIASLVDTAF IGHIGPIEQA AVGVSIAVFN QASKIAIFPL VSVTTSFVAE
101: EDAISNEDMQ DDKCMEKNEG DDAEAFETDS PSKSESKSLL PKNDSTESIC KSEKIVTSFE IVKSKPEKRH IPSASSALII GAVLGIIQAV FLIAGAKPLL
201: KFMGVKPGSP MSKPAQDYLR LRSLGAPAVL LSLAMQGVFR GFKDTKTPLF ATVAGDLANI ILDPIFMFVF HLGVRGAAIA HVISQYLISV ILFLRLLEKV
301: DIVPPSLKYL QFARFLTNGF LLLVRVIAAT FCVTLAASLA ARLGPTQMAA FQVCLQIWLA TSLLADGLAV AGQAILASAF AQKDFNRCTA TASRVLQLGV
401: VLGLVLALVL GIGLHYGARV FTKDVNVLNL IGIGIPFVAA TQPINCLAFV FDGVNFGASD FAYSAYSMLT VALFSIIFLL ILSSNYGYIG IWVALTIYMS
501: LRALAGFGRI GTGTGPWKFL QS

Best Arabidopsis Sequence Match ( AT1G51340.2 )
(BLAST)

001: MMSEDGYNTD FPRNPLYIFF SDFRSVLKFD ELGLEIARIA LPAALALTAD PIASLVDTAF IGQIGPVELA AVGVSIALFN QVSRIAIFPL VSITTSFVAE
101: EDACSSQQDT VRDHKECIEI GINNPTEETI ELIPEKHKDS LSDEFKTSSS IFSISKPPAK KRNIPSASSA LIIGGVLGLF QAVFLISAAK PLLSFMGVKH
201: DSPMMRPSQR YLSLRSLGAP AVLLSLAAQG VFRGFKDTTT PLFATVIGDV TNIILDPIFI FVFRLGVTGA ATAHVISQYL MCGILLWKLM GQVDIFNMST
301: KHLQFCRFMK NGFLLLMRVI AVTFCVTLSA SLAAREGSTS MAAFQVCLQV WLATSLLADG YAVAGQAILA SAFAKKDYKR AAATASRVLQ LGLVLGFVLA
401: VILGAGLHFG ARVFTKDDKV LHLISIGLPF VAGTQPINAL AFVFDGVNFG ASDFGYAAAS LVMVAIVSIL CLLFLSSTHG FIGLWFGLTI YMSLRAAVGF
501: WRIGTGTGPW SFLRS

Arabidopsis Description

DTX42Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178W9H8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.