Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g085340.1.1 | Tomato | golgi, plasma membrane | 63.48 | 81.55 |
| AT2G38330.1 | Thale cress | plastid | 64.74 | 49.33 |
| VIT_08s0058g00510.t01 | Wine grape | plastid | 67.76 | 48.21 |
| KRH49460 | Soybean | plastid | 64.99 | 47.87 |
| CDY07737 | Canola | plastid | 63.98 | 47.65 |
| Bra000055.1-P | Field mustard | plastid | 60.96 | 47.45 |
| CDY63154 | Canola | plastid | 60.45 | 46.97 |
| GSMUA_Achr11P... | Banana | plastid | 61.21 | 46.91 |
| HORVU3Hr1G016180.9 | Barley | mitochondrion | 21.16 | 46.67 |
| HORVU5Hr1G040350.2 | Barley | golgi, mitochondrion, plasma membrane | 29.72 | 46.27 |
| KXG27560 | Sorghum | plastid | 61.71 | 45.2 |
| TraesCS5A01G151800.2 | Wheat | plastid | 61.96 | 44.57 |
| TraesCS5B01G150400.2 | Wheat | plastid | 61.96 | 44.48 |
| TraesCS5D01G157000.2 | Wheat | plastid | 61.96 | 44.48 |
| KXG22777 | Sorghum | plastid | 61.46 | 44.12 |
| TraesCS4A01G180600.2 | Wheat | plastid | 60.96 | 44.0 |
| HORVU4Hr1G024560.27 | Barley | plastid | 61.46 | 43.96 |
| TraesCS4D01G131900.1 | Wheat | plastid | 60.71 | 43.82 |
| Zm00001d005080_P002 | Maize | plastid | 61.21 | 43.39 |
| Os12t0106600-01 | Rice | plastid | 59.45 | 42.91 |
| HORVU3Hr1G027710.1 | Barley | golgi, plasma membrane | 18.89 | 42.86 |
| KRH00327 | Soybean | plastid | 58.19 | 38.95 |
| PGSC0003DMT400047961 | Potato | plastid | 52.64 | 33.93 |
| PGSC0003DMT400018991 | Potato | cytosol, plasma membrane, vacuole | 41.81 | 32.42 |
| PGSC0003DMT400022359 | Potato | plastid | 47.61 | 31.61 |
| PGSC0003DMT400027815 | Potato | cytosol, plasma membrane, vacuole | 41.31 | 31.42 |
| PGSC0003DMT400017707 | Potato | cytosol, plasma membrane, vacuole | 40.55 | 29.98 |
| Solyc10g085330.1.1 | Tomato | plastid | 18.39 | 29.67 |
| PGSC0003DMT400017700 | Potato | plasma membrane | 39.8 | 29.42 |
| Zm00001d035381_P001 | Maize | plasma membrane | 43.32 | 25.18 |
| KRH27483 | Soybean | cytosol | 11.08 | 20.18 |
| PGSC0003DMT400008050 | Potato | mitochondrion, plasma membrane, plastid, vacuole | 20.15 | 16.74 |
| PGSC0003DMT400008778 | Potato | plastid | 22.42 | 16.36 |
| PGSC0003DMT400008058 | Potato | plastid | 22.92 | 16.34 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400028660 | EnsemblPlantsGene:PGSC0003DMG400011035 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | InterPro:MATE_fam | PANTHER:PTHR42893 | PANTHER:PTHR42893:SF1 | PFAM:PF01554 | PGSC:PGSC0003DMG400011035 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI00029681B8 | UniProt:M1ARH2 | MapMan:24.2.4.1.3 | : |
Description
DNA-damage-inducible protein f [Source:PGSC_GENE;Acc:PGSC0003DMG400011035]
Coordinates
chr10:-:53746510..53754291
Molecular Weight (calculated)
41034.5 Da
IEP (calculated)
4.705
GRAVY (calculated)
0.919
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MYFVGSVELA AVGISVSVFN LISKLFNVPL LNVTTSFVAE EQALIAKDSS PDSQSKILLP SVSTSLLLAL GLGIVEAVGL FVGSGFLMNT MGISVIFSVS
101: LFGLVDVSQD SPMREPAEQF LTMRAFGAPP VVIALAAQGT FRGFKDTKTP LYAVGKSSGL SGGGNLVNAL LSPILIFTFG FGVSGAAIAG VISEYVVGGA
201: LLIGRTLSLL ITTTLSTALA AREGPVPMAG HQICVEVWLA VSLLTDALAL AGQALLAGGV SQGNYSQARE VVYKVLQIGA LTGVALGFSL FIGFGALSAL
301: FSTDSEVVEI AKSGTLFVAG SQPVNAIAFV LDGLYYGVSD FEFAAYSMFV IGIISSIFLL VAAPLFGLPG VWAGLFLFVA LRVVAGLWRC VNSKVDK
101: LFGLVDVSQD SPMREPAEQF LTMRAFGAPP VVIALAAQGT FRGFKDTKTP LYAVGKSSGL SGGGNLVNAL LSPILIFTFG FGVSGAAIAG VISEYVVGGA
201: LLIGRTLSLL ITTTLSTALA AREGPVPMAG HQICVEVWLA VSLLTDALAL AGQALLAGGV SQGNYSQARE VVYKVLQIGA LTGVALGFSL FIGFGALSAL
301: FSTDSEVVEI AKSGTLFVAG SQPVNAIAFV LDGLYYGVSD FEFAAYSMFV IGIISSIFLL VAAPLFGLPG VWAGLFLFVA LRVVAGLWRC VNSKVDK
001: MAAVATSFCF SPHRSPSRFG NPNSSIRRTI VCKSSPRDES PAVSTSSQRP EKQQNPLTSQ NKPDHDHKPD PGIGKIGMEI MSIALPAALA LAADPITSLV
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E
Arabidopsis Description
DTX44Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VTF1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.