CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G157000.2	Wheat	plastid	77.49	75.95
TraesCS5B01G150400.2	Wheat	plastid	77.31	75.77
TraesCS5A01G151800.2	Wheat	plastid	76.94	75.54
KXG22777	Sorghum	plastid	70.66	69.26
Solyc10g085340.1.1	Tomato	golgi, plasma membrane	36.53	64.08
GSMUA_Achr11P...	Banana	plastid	60.89	63.71
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	45.2	61.71
KRH49460	Soybean	plastid	58.67	59.0
VIT_08s0058g00510.t01	Wine grape	plastid	60.52	58.78
AT2G38330.1	Thale cress	plastid	55.9	58.16
Bra000055.1-P	Field mustard	plastid	54.06	57.45
CDY07737	Canola	plastid	55.9	56.85
CDY63154	Canola	plastid	53.51	56.75
KRH00327	Soybean	plastid	54.06	49.41
EES14441	Sorghum	plasma membrane	41.7	43.05
KXG32398	Sorghum	plastid	40.77	40.7
KXG36122	Sorghum	mitochondrion, plasma membrane	42.62	39.62
EER92636	Sorghum	cytosol, peroxisome, vacuole	38.19	36.64
Solyc10g085330.1.1	Tomato	plastid	16.05	35.37
OQU88105	Sorghum	cytosol, peroxisome, plasma membrane	38.01	34.33
KRH27483	Soybean	cytosol	12.73	31.65
OQU84246	Sorghum	plasma membrane	18.82	24.06

Protein Annotations

MapMan:24.2.4.1.3	UniProt:A0A1B6PPG5	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlants:KXG27560	ProteinID:KXG27560	ProteinID:KXG27560.1	ProteinID:KXG27562.1	InterPro:MATE_fam
PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF1	EnsemblPlantsGene:SORBI_3005G005400	TIGRFAMs:TIGR00797	TMHMM:TMhelix
UniParc:UPI00081AB680	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:422923..427337

Molecular Weight (calculated)

57366.4 Da

IEP (calculated)

9.853

GRAVY (calculated)

0.523

Length

542 amino acids

Sequence
(BLAST)

001: MVTSPLVTVR AAAFALTLTP SSRLSRASFR ACLAQRRRRR WPPRCSGKQA AVVEEETPSP QEAKNGEGEQ GRGPQGWFAL DTIGLDILSI ALPAALALAA
101: DPIAALVDTA FVGHIGSAEL AAVGVSISVF NLVSKLFNVP LLNVTTSFVA EQQAVDDDSA GSREGYDFPR SPEELTQKRK FLPAVSTSLA LAAGIGLMET
201: VALNFGSGTL MDMIGIPIDS PMRIPAEQFL TFRAYGAPPI VIALAAQGAF RGLMDTKTPL YAVGVGNLIN VILDAILVFP LGLGVRGAAL ATVTSEYVIA
301: CILLWKLNSK VVLFSRNVIG GGIIRYLKSG GLLIGRTIAV LLTMTLSTSL AARQGPVPMA GHQLCLQVWL TISLLNDALA LAGQALLASE YAKGNYKQAR
401: LVLYRVLQIG GVTGIALAVV LFFGFGSFSV LFTNDRAVLD IAKSGVWFVT VSQPINAIAF VIDGLYYGVS DFAYAAYSMF FVGAVSSAFL LAAAPKLGLG
501: GVWSGLVLFM SLRAAAGFWR LGSKGGPWKQ IWSDTKLIND KK

Best Arabidopsis Sequence Match ( AT2G38330.1 )
(BLAST)

001: MAAVATSFCF SPHRSPSRFG NPNSSIRRTI VCKSSPRDES PAVSTSSQRP EKQQNPLTSQ NKPDHDHKPD PGIGKIGMEI MSIALPAALA LAADPITSLV
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E

Arabidopsis Description

DTX44Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VTF1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.