Factsheet for GSMUA_Achr11P19700_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g085340.1.1	Tomato	golgi, plasma membrane	37.84	63.43
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	46.91	61.21
KXG27560	Sorghum	plastid	63.71	60.89
TraesCS5D01G157000.2	Wheat	plastid	63.9	59.86
TraesCS5A01G151800.2	Wheat	plastid	63.51	59.6
TraesCS5B01G150400.2	Wheat	plastid	63.51	59.49
VIT_08s0058g00510.t01	Wine grape	plastid	63.71	59.14
Os12t0106600-01	Rice	plastid	61.78	58.18
AT2G38330.1	Thale cress	plastid	57.72	57.39
KRH49460	Soybean	plastid	59.65	57.33
TraesCS4D01G131900.1	Wheat	plastid	60.81	57.27
TraesCS4A01G180600.2	Wheat	plastid	60.62	57.09
HORVU4Hr1G024560.27	Barley	plastid	61.0	56.94
HORVU5Hr1G040350.2	Barley	golgi, mitochondrion, plasma membrane	27.8	56.47
Bra000055.1-P	Field mustard	plastid	54.83	55.69
CDY07737	Canola	plastid	56.76	55.16
Zm00001d005080_P002	Maize	plastid	59.46	55.0
CDY63154	Canola	plastid	54.25	54.99
KXG22777	Sorghum	plastid	58.69	54.97
HORVU3Hr1G027710.1	Barley	golgi, plasma membrane	17.95	53.14
HORVU3Hr1G016180.9	Barley	mitochondrion	18.34	52.78
GSMUA_AchrUn_...	Banana	plasma membrane	20.66	48.42
KRH00327	Soybean	plastid	53.67	46.88
GSMUA_Achr4P06960_001	Banana	plasma membrane	42.86	44.22
GSMUA_Achr3P29780_001	Banana	plasma membrane	42.08	42.08
GSMUA_Achr8P31410_001	Banana	cytosol, peroxisome, plasma membrane	39.96	41.99
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	22.01	41.76
Solyc10g085330.1.1	Tomato	plastid	18.73	39.43
Zm00001d035381_P001	Maize	plasma membrane	44.59	33.82
KRH27483	Soybean	cytosol	12.93	30.73
GSMUA_Achr1P16310_001	Banana	plasma membrane	17.76	21.7

Protein Annotations

MapMan:24.2.4.1.3	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSMUA_Achr11G19700_001	EnsemblPlants:GSMUA_Achr11P19700_001	EnsemblPlants:GSMUA_Achr11T19700_001	UniProt:M0RTQ0	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR42893	PANTHER:PTHR42893:SF1	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI000294BD30	SEG:seg

Description

MATE efflux protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G19700_001]

Coordinates

chr11:+:20788503..20794794

Molecular Weight (calculated)

55298.5 Da

IEP (calculated)

9.374

GRAVY (calculated)

0.639

Length

518 amino acids

Sequence
(BLAST)

001: MAIASFHPPI QILSPAPSFP RPPSKRLRPL LPRSPTRPKS QQRRVSRRQA KPQPSDTDRS LLTRASGLLN RIRGDEISLD ILSIALPAVL ALAADPIASI
101: VDTAFVGHLG SVELAAVGVS VSIFNLVSKL FNVPLLNVTT SFVAEQQALE SLQQEPINYA DGESRKFLPA VSTSLAFAAV VGIAESMALI FGLGLLMDFM
201: GISVDSPMRL PAEQFLTLRA YGAPAIVLAL AAQGTFRGFM DTKTPLYAIG AGSLLNAILD PILIFLFGLG VGGAAISTVI SEYMIAGILL WKLNEKIILS
301: PNINGEGMSL YLKSVGLLVG RTIAVLITMT ISTSMAAREG PVAMAGHQIC LQVWLAVSLL NDALALAGQA LLASEYTRKN YVQARLVIYR VIQIGAATGI
401: ALGVLLFFGF EPFTTLFTTD FAFVTVSQPI NALAFVIDGL YYGVSDFSYA AYSMILVGVI SSLFLLIAAP VFGLAGVWAG LVFFMSLRAV AGIWRLQTKG
501: GPWKILLSDM EIGTTKEC

Best Arabidopsis Sequence Match ( AT2G38330.1 )
(BLAST)

001: MAAVATSFCF SPHRSPSRFG NPNSSIRRTI VCKSSPRDES PAVSTSSQRP EKQQNPLTSQ NKPDHDHKPD PGIGKIGMEI MSIALPAALA LAADPITSLV
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E

Arabidopsis Description

DTX44Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VTF1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.