Factsheet for HORVU3Hr1G027710.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
TargetP:	secretory
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G040350.2	Barley	golgi, mitochondrion, plasma membrane	87.43	60.0
Solyc10g085340.1.1	Tomato	golgi, plasma membrane	53.14	30.1
HORVU3Hr1G016180.9	Barley	mitochondrion	30.29	29.44
HORVU4Hr1G024560.27	Barley	plastid	92.57	29.19
TraesCS4D01G131900.1	Wheat	plastid	91.43	29.09
TraesCS4A01G180600.2	Wheat	plastid	90.86	28.91
HORVU1Hr1G085680.1	Barley	plasma membrane	40.57	24.07
KXG22777	Sorghum	plastid	76.0	24.05
Os12t0106600-01	Rice	plastid	75.43	24.0
Zm00001d005080_P002	Maize	plastid	74.29	23.21
TraesCS5B01G150400.2	Wheat	plastid	68.0	21.52
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	42.86	18.89
GSMUA_Achr11P...	Banana	plastid	53.14	17.95
Bra000055.1-P	Field mustard	plastid	52.0	17.84
CDY63154	Canola	plastid	51.43	17.61
KRH49460	Soybean	plastid	53.71	17.44
Zm00001d035381_P001	Maize	plasma membrane	67.43	17.28
AT2G38330.1	Thale cress	plastid	50.86	17.08
CDY07737	Canola	plastid	52.0	17.07
VIT_08s0058g00510.t01	Wine grape	plastid	54.29	17.03
KRH00327	Soybean	plastid	44.57	13.15
HORVU1Hr1G068960.15	Barley	plasma membrane	37.71	12.82
HORVU6Hr1G095270.9	Barley	golgi, plasma membrane, plastid	41.14	11.82
HORVU4Hr1G067510.5	Barley	cytosol, peroxisome, plasma membrane	34.86	10.99
HORVU6Hr1G041060.5	Barley	extracellular	4.57	6.3
HORVU6Hr1G012070.9	Barley	peroxisome, plastid	16.0	5.54
Solyc10g085330.1.1	Tomato	plastid	5.14	3.66
KRH27483	Soybean	cytosol	3.43	2.75
HORVU7Hr1G109470.1	Barley	golgi, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU3Hr1G027710.1	EnsemblPlantsGene:HORVU3Hr1G027710	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:MATE_fam	PANTHER:PTHR42893	PANTHER:PTHR42893:SF1	PFAM:PF01554	SEG:seg
TMHMM:TMhelix	UniParc:UPI000B46D2BE	UniProt:A0A287KJ69	MapMan:24.2.4.1.3	:	:

Description

No Description!

Coordinates

chrchr3H:+:120175926..120177664

Molecular Weight (calculated)

19268.9 Da

IEP (calculated)

9.386

GRAVY (calculated)

0.697

Length

175 amino acids

Sequence
(BLAST)

001: RLRRIHGNHR YLAAFILLWK LNNELVLFSW NVIGGDIIRY LKSGALLIAR TIAVILPLWL STSLAARQGP VPMAGYEISL QVWLTISLLN DALALAGQAL
101: LASEYAKGNY KQARLVLYRV LHIGGVTGLA LAATLFLGFG YLTLLFTDDP AVLDIAQSGV WFVTITADKC YCFCV

Best Arabidopsis Sequence Match ( AT2G38330.1 )
(BLAST)

001: MAAVATSFCF SPHRSPSRFG NPNSSIRRTI VCKSSPRDES PAVSTSSQRP EKQQNPLTSQ NKPDHDHKPD PGIGKIGMEI MSIALPAALA LAADPITSLV
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E

Arabidopsis Description

DTX44Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VTF1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.