Factsheet for Bra000055.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63154	Canola	plastid	98.63	98.43
CDY07737	Canola	plastid	99.8	95.5
AT2G38330.1	Thale cress	plastid	87.84	85.99
Solyc10g085340.1.1	Tomato	golgi, plasma membrane	38.82	64.08
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	47.45	60.96
VIT_08s0058g00510.t01	Wine grape	plastid	64.12	58.6
KRH49460	Soybean	plastid	60.0	56.77
GSMUA_Achr11P...	Banana	plastid	55.69	54.83
KXG27560	Sorghum	plastid	57.45	54.06
TraesCS5A01G151800.2	Wheat	plastid	57.65	53.26
TraesCS5B01G150400.2	Wheat	plastid	57.65	53.16
TraesCS5D01G157000.2	Wheat	plastid	57.45	52.98
KXG22777	Sorghum	plastid	56.86	52.44
Zm00001d005080_P002	Maize	plastid	57.45	52.32
HORVU3Hr1G027710.1	Barley	golgi, plasma membrane	17.84	52.0
HORVU4Hr1G024560.27	Barley	plastid	56.47	51.89
TraesCS4D01G131900.1	Wheat	plastid	55.88	51.82
Os12t0106600-01	Rice	plastid	55.88	51.82
HORVU3Hr1G016180.9	Barley	mitochondrion	18.24	51.67
TraesCS4A01G180600.2	Wheat	plastid	55.29	51.27
HORVU5Hr1G040350.2	Barley	golgi, mitochondrion, plasma membrane	24.9	49.8
KRH00327	Soybean	plastid	54.12	46.54
Solyc10g085330.1.1	Tomato	plastid	19.8	41.06
Bra030446.1-P	Field mustard	plasma membrane	40.59	40.04
Bra014272.1-P	Field mustard	plasma membrane	39.61	38.92
Bra010745.1-P	Field mustard	plastid	39.8	37.8
Bra040047.1-P	Field mustard	cytosol, plasma membrane, vacuole	37.25	35.98
Bra001282.1-P	Field mustard	plasma membrane	36.08	35.94
Bra001283.1-P	Field mustard	plasma membrane	36.47	35.16
Bra029694.1-P	Field mustard	plasma membrane	36.08	34.33
Zm00001d035381_P001	Maize	plasma membrane	43.73	32.65
KRH27483	Soybean	cytosol	13.14	30.73
Bra011880.1-P	Field mustard	mitochondrion	19.22	18.22
Bra031182.1-P	Field mustard	plastid	19.22	17.75
Bra000583.1-P	Field mustard	plastid	17.45	17.28

Protein Annotations

MapMan:24.2.4.1.3	EnsemblPlantsGene:Bra000055	EnsemblPlants:Bra000055.1	EnsemblPlants:Bra000055.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4C777	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR42893	PANTHER:PTHR42893:SF1	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002540096	SEG:seg

Description

AT2G38330 (E=4e-143) | MATE efflux family protein

Coordinates

chrA03:+:9092184..9094770

Molecular Weight (calculated)

53786.0 Da

IEP (calculated)

6.155

GRAVY (calculated)

0.598

Length

510 amino acids

Sequence
(BLAST)

001: MAAVATFLSL SPLRSSSTFQ LRDLPRNPNP SIRRRIHFKS PVVAASSKNS SPQNIQNIVE SPEPDPDPKP EHGIGNIGME IMSIALPAAL ALAADPITSL
101: VDTAFVGHIG SAELAAVGVS VSVFNLVSKL FNVPLLNVTT SFVAEEQAIA AKDDKDSTET RKKVLPSVST SLVLAAGVGI AEAIALSLGS DYLMDIMAIP
201: FDSPMRIPAE QFLRLRAYGA PPIVVALAAQ GAFRVAGNVL NAILDPILIF VLGFGISGAA AATVISEYLI AFILLWKLNE NVVLLSPQIQ VGRANQYLKS
301: GGLLIGRTVA LLVPFTLATS LVAQKGPTQM AGHQICLEIW LAVSLLTDAL AIAAQSLLAT SFSQGEYKQA REVLYGVLQV GLATGTGLAA VLFIGFEPFS
401: SLFTTDSEVL KIALSGTLFV AGSQPVNAIA FVLDGLYYGV SDFGFAAYAM VIAGFISSLV MLLAAPTYGL AGIWTGLFIF MALRLVAGAW RLGTRTGPWK
501: MLWLAPDKPE

Best Arabidopsis Sequence Match ( AT2G38330.1 )
(BLAST)

001: MAAVATSFCF SPHRSPSRFG NPNSSIRRTI VCKSSPRDES PAVSTSSQRP EKQQNPLTSQ NKPDHDHKPD PGIGKIGMEI MSIALPAALA LAADPITSLV
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E

Arabidopsis Description

DTX44Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VTF1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.