Factsheet for TraesCS5B01G150400.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G151800.2	Wheat	plastid	97.11	97.28
TraesCS5D01G157000.2	Wheat	plastid	96.75	96.75
KXG27560	Sorghum	plastid	75.77	77.31
Os12t0106600-01	Rice	plastid	71.43	71.82
HORVU4Hr1G024560.27	Barley	plastid	70.71	70.45
Zm00001d005080_P002	Maize	plastid	70.34	69.46
HORVU5Hr1G040350.2	Barley	golgi, mitochondrion, plasma membrane	31.46	68.24
HORVU3Hr1G027710.1	Barley	golgi, plasma membrane	21.52	68.0
Solyc10g085340.1.1	Tomato	golgi, plasma membrane	36.17	64.72
HORVU3Hr1G016180.9	Barley	mitochondrion	20.8	63.89
GSMUA_Achr11P...	Banana	plastid	59.49	63.51
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	44.48	61.96
AT2G38330.1	Thale cress	plastid	54.61	57.97
Bra000055.1-P	Field mustard	plastid	53.16	57.65
CDY63154	Canola	plastid	52.62	56.95
CDY07737	Canola	plastid	54.79	56.85
VIT_08s0058g00510.t01	Wine grape	plastid	57.14	56.63
KRH49460	Soybean	plastid	54.61	56.03
TraesCS4B01G322300.1	Wheat	plasma membrane	28.03	47.55
KRH00327	Soybean	plastid	49.73	46.37
TraesCS6B01G470700.2	Wheat	plasma membrane	36.17	44.05
Zm00001d035381_P001	Maize	plasma membrane	52.44	42.46
TraesCS1B01G315900.1	Wheat	plasma membrane	36.89	41.05
TraesCS4B01G244400.1	Wheat	cytosol, plasma membrane, vacuole	36.89	36.89
Solyc10g085330.1.1	Tomato	plastid	15.73	35.37
KRH27483	Soybean	cytosol	12.12	30.73
TraesCS6B01G090100.1	Wheat	plasma membrane	19.17	20.66

Protein Annotations

EnsemblPlants:TraesCS5B01G150400.2	EnsemblPlantsGene:TraesCS5B01G150400	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0055085
InterPro:MATE_fam	PANTHER:PTHR42893	PANTHER:PTHR42893:SF1	PFAM:PF01554	SEG:seg	TIGR:cd13136
TIGRFAMs:TIGR00797	TMHMM:TMhelix	MapMan:24.2.4.1.3	:	:	:

Description

No Description!

Coordinates

chr5B:-:278224950..278228394

Molecular Weight (calculated)

58428.4 Da

IEP (calculated)

8.193

GRAVY (calculated)

0.454

Length

553 amino acids

Sequence
(BLAST)

001: MAATSPAPTR AAAALTLAPH RRVHHVHMPS GRPCPCRSSA APRRRTPRCR AKPTVKGVVD DDEDASRESE PERKEGEEDM TAMGTLPGWL RLDTVGMDIL
101: SIAAPAVLAL AADPIAALVD TAFVGHIGPT ELAAVGVSIS VFNLVSKLFN VPLLNVTTSF VAEQQAVDDS YRGTGENEFR RSPDNKFSEE RKFLPAVTTS
201: LALASGIGLM ETLALIFGSG TLMDVIGIPV DSPVRIPAEQ FLTFRAYGAP PIIVALAAQG AFRGLMDTKT PLYAIGVGNL VNAILDAIFV FPLGLGVRGA
301: ALATVTSEYV IACILLWKLN SKVVIFSGKI IGGGMIRYLK SGGLLIGRTI AVLLTMTLST SLAAREGPVP MAGHQLCLQV WLTISLLNDA LALAGQALLA
401: TEYTKRNYKQ ARMVLYRVLQ IGGATGTALA IILFFGFGSF SSLFTDDPAV LGIAKSGVWF VAISQPINAA AFVVDGLYYG VSDFAYAAYS MFFAGAISSA
501: FLLVAAPEFG LGGVWAGLIL FMSLRAVAGL WRLGSKGGPW NSILSDTDLS DKL

Best Arabidopsis Sequence Match ( AT2G38330.1 )
(BLAST)

001: MAAVATSFCF SPHRSPSRFG NPNSSIRRTI VCKSSPRDES PAVSTSSQRP EKQQNPLTSQ NKPDHDHKPD PGIGKIGMEI MSIALPAALA LAADPITSLV
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E

Arabidopsis Description

DTX44Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VTF1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.