Factsheet for Solyc10g085330.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27483	Soybean	cytosol	20.73	23.39
Bra000055.1-P	Field mustard	plastid	41.06	19.8
CDY63154	Canola	plastid	41.06	19.77
CDY07737	Canola	plastid	41.06	18.95
GSMUA_Achr11P...	Banana	plastid	39.43	18.73
AT2G38330.1	Thale cress	plastid	39.43	18.62
KRH49460	Soybean	plastid	40.65	18.55
VIT_08s0058g00510.t01	Wine grape	plastid	41.87	18.46
PGSC0003DMT400028660	Potato	endoplasmic reticulum, plasma membrane	29.67	18.39
HORVU4Hr1G024560.27	Barley	plastid	38.21	16.94
TraesCS4D01G131900.1	Wheat	plastid	37.8	16.91
TraesCS4A01G180600.2	Wheat	plastid	36.99	16.55
KXG22777	Sorghum	plastid	36.59	16.27
TraesCS5D01G157000.2	Wheat	plastid	36.18	16.09
KXG27560	Sorghum	plastid	35.37	16.05
Zm00001d005080_P002	Maize	plastid	36.18	15.89
TraesCS5A01G151800.2	Wheat	plastid	35.37	15.76
TraesCS5B01G150400.2	Wheat	plastid	35.37	15.73
Os12t0106600-01	Rice	plastid	34.55	15.45
KRH00327	Soybean	plastid	36.59	15.18
Solyc11g065820.1.1	Tomato	cytosol, plasma membrane, vacuole	30.08	14.51
Solyc01g008420.2.1	Tomato	plasma membrane	30.08	13.81
Solyc01g087150.2.1	Tomato	plasma membrane	28.86	13.52
Solyc01g112090.2.1	Tomato	plastid	31.3	12.66
Zm00001d035381_P001	Maize	plasma membrane	34.96	12.59
Solyc02g061760.2.1	Tomato	plastid	28.05	12.52
Solyc10g054110.1.1	Tomato	plastid	14.23	9.33
Solyc01g110280.2.1	Tomato	plastid	18.29	8.08
HORVU3Hr1G027710.1	Barley	golgi, plasma membrane	3.66	5.14
HORVU3Hr1G016180.9	Barley	mitochondrion	3.25	4.44
HORVU5Hr1G040350.2	Barley	golgi, mitochondrion, plasma membrane	3.66	3.53
Solyc10g085340.1.1	Tomato	golgi, plasma membrane	3.25	2.59
Solyc10g054100.1.1	Tomato	endoplasmic reticulum, vacuole	0.0	0.0

Protein Annotations

MapMan:24.2.4.1.3	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0055085	UniProt:K4D3W7
InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR42893	PANTHER:PTHR42893:SF1	EnsemblPlantsGene:Solyc10g085330.1	EnsemblPlants:Solyc10g085330.1.1
TMHMM:TMhelix	UniParc:UPI000276A8B0	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:+:64548112..64549858

Molecular Weight (calculated)

26314.4 Da

IEP (calculated)

4.934

GRAVY (calculated)

0.191

Length

246 amino acids

Sequence
(BLAST)

001: MATGLHQQCI NPLFTQSLHR KNQNYSYFCN CTNQLRNNNT NCSARLRTTL LKSINEKNRK TLSQNSISNS NSDSGESRVK SPDPDPDIPS SSSSSLWDSV
101: TSLLEVLKFD GIGWDIVSIA LPAALALASD PITSLVDTAF VGHLGSVELA AVGISVSVFN LISKLFNVPL LNVTTSFVAE EQALIAKDSS PDSQSKILLP
201: SVSTSLLLAL GLGIVEAVGL FVGSGFLMNT MGISVVCLNL ENDLFF

Best Arabidopsis Sequence Match ( AT2G38330.1 )
(BLAST)

001: MAAVATSFCF SPHRSPSRFG NPNSSIRRTI VCKSSPRDES PAVSTSSQRP EKQQNPLTSQ NKPDHDHKPD PGIGKIGMEI MSIALPAALA LAADPITSLV
101: DTAFVGHIGS AELAAVGVSV SVFNLVSKLF NVPLLNVTTS FVAEEQAIAA KDDNDSIETS KKVLPSVSTS LVLAAGVGIA EAIALSLGSD FLMDVMAIPF
201: DSPMRIPAEQ FLRLRAYGAP PIVVALAAQG AFRGFKDTTT PLYAVVAGNV LNAVLDPILI FVLGFGISGA AAATVISEYL IAFILLWKLN ENVVLLSPQI
301: KVGRANQYLK SGGLLIGRTV ALLVPFTLAT SLAAQNGPTQ MAGHQIVLEI WLAVSLLTDA LAIAAQSLLA TTYSQGEYKQ AREVLFGVLQ VGLATGTGLA
401: AVLFITFEPF SSLFTTDSEV LKIALSGTLF VAGSQPVNAL AFVLDGLYYG VSDFGFAAYS MVIVGFISSL FMLVAAPTFG LAGIWTGLFL FMALRLVAGA
501: WRLGTRTGPW KMLWSAPEKP E

Arabidopsis Description

DTX44Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VTF1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.